Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 381 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  317 bits (811), Expect = 5e-91
 Identities = 191/401 (47%), Positives = 231/401 (57%), Gaps = 32/401 (7%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGL 60
           MKK+L+  A  G  A  AHAQSSVTLYG+ID G     N  G   +  +SG + GSR+GL
Sbjct: 1   MKKTLMVAALTGVCATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQETSGSVNGSRWGL 60

Query: 61  RGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSS-QFGTVTLGRQYDSVV 119
           RG+EDLGGGLKAIF LENGF +N+G L QGG  FGRQA+VGL+S QFG VTLGRQYDS+V
Sbjct: 61  RGSEDLGGGLKAIFTLENGFGINDGTLKQGGREFGRQAFVGLTSDQFGAVTLGRQYDSMV 120

Query: 120 DYVGPLE-AGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIAG 178
           DYVGPL   G Q+GG   AHP D DN NN++R NN+VKY S NYGG  FG  Y F   A 
Sbjct: 121 DYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQSVNYGGFKFGALYGFSNQAD 180

Query: 179 NVTSNQIWSLGAGYNNGPLVLGVGY--LNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAG 236
              +N+ +S GA YN G L +   Y  LN+     A   FN+G      A +  +  +AG
Sbjct: 181 GFANNRAYSAGASYNWGGLNVAAAYLQLNSNGATGAAAAFNSGG-----AVSSDNTFFAG 235

Query: 237 FTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNL--------GASYASPFKGQSATFNN 288
                  Q  GAG  Y FG AT+G  YS     +L        G S    F   SA F N
Sbjct: 236 -----RQQTWGAGANYAFGPATVGLVYSQTNLSSLAGIGAGASGQSGGIAFGNNSAHFQN 290

Query: 289 AELNFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQH 348
            E N +Y LTPA+ +  +Y YTR A + G +R  ++Q  +   Y LSKRTDVY+ G YQ 
Sbjct: 291 FEANARYALTPAVSIAGSYTYTR-ASLAG-TRPHWNQFNLQTAYALSKRTDVYLQGEYQQ 348

Query: 349 ALGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389
                     AVVD  A INGL  S N  Q     G+RH+F
Sbjct: 349 ------VNENAVVD--ADINGLGASGNNKQVAVTAGLRHRF 381