Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 372 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  285 bits (730), Expect = 1e-81
 Identities = 172/395 (43%), Positives = 221/395 (55%), Gaps = 38/395 (9%)

Query: 3   KSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGLRG 62
           ++ +A A  G  A  A AQSSVTLYGI+D GF    N  G+  Y  + G +QGSR+GL G
Sbjct: 8   RTAIAFAVAGLAAQAAQAQSSVTLYGIVDAGFTFTNNQKGEKAYQATQGNVQGSRWGLLG 67

Query: 63  TEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLS-SQFGTVTLGRQYDSVVDY 121
           TEDLGGG K +F LENGF +  G LGQGG +FGR A+V LS S+ GT+TLGRQY+SV DY
Sbjct: 68  TEDLGGGNKVMFKLENGFSLETGALGQGGRIFGRSAWVALSNSKAGTITLGRQYNSVQDY 127

Query: 122 VGPLE-----AGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGI 176
           +  L+     A  Q+G  I     D D+ NN YRTNN VKYT+  Y G T    Y+F   
Sbjct: 128 LSNLQINGVGAMSQYGNAIY----DNDDINNTYRTNNAVKYTTPTYAGFTANAMYAFSNA 183

Query: 177 AGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAG 236
           AG+  +N+ WS+GA Y NGP+ L   Y     PA       T +  AAP+    +   + 
Sbjct: 184 AGDFANNRAWSVGADYVNGPVRLDAAYSLVNQPA-------TSTAGAAPSDNYYNTGSSI 236

Query: 237 FTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFKYQ 296
            +     QV GAGGAY FG AT+   Y+N +F  L         G S  F N E + KYQ
Sbjct: 237 ISGVKRNQVWGAGGAYVFGPATVALLYTNSQFQLL--------TGGSLRFANYEASLKYQ 288

Query: 297 LTPALLVGAAYDY-TRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALGDTVT 355
            TPA L+   Y Y T+       + A Y+Q ++G +YFLSK TD+Y+ G+YQ + G    
Sbjct: 289 FTPATLLALGYIYTTQNTSGTTATNAHYNQLSLGGEYFLSKTTDLYLNGIYQRSSG---- 344

Query: 356 AGGAVVDATAGINGLSG-SSNQNQFTARIGIRHKF 389
                  + A + G+S  SSN  QF    GIRHKF
Sbjct: 345 -------SKAWVEGISNPSSNNGQFVTVAGIRHKF 372