Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 404 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  261 bits (666), Expect = 3e-74
 Identities = 161/410 (39%), Positives = 217/410 (52%), Gaps = 32/410 (7%)

Query: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNINTN---------SGGKHLYNLSSG 51
           +K+S LALAA G   G AHAQSSVTLYG +D G    +N         + G   Y L  G
Sbjct: 6   VKRSALALAAFGLSMG-AHAQSSVTLYGTVDAGLIYTSNQQTTLANGSTNGHANYQLGGG 64

Query: 52  VLQGSRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQ-FGTVT 110
            L  SR+GL GTED+GGG    F LEN F + +G + Q   +F R A+VG+++  +G +T
Sbjct: 65  NLVPSRWGLMGTEDIGGGTTVNFALENSFLIGSGAMLQSNTLFNRNAWVGVNNATYGALT 124

Query: 111 LGRQYDSVVDYVGPLEAGDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGT 170
            GRQYD   DY+G   + + W     +H GD+DN N A+  NN++KY S ++GG T GG 
Sbjct: 125 FGRQYDPFSDYMGAYASSNNWATLYGSHFGDVDNLNEAFNFNNSIKYISPSFGGFTVGGL 184

Query: 171 YSFGGIAGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTP--AAAGGLFNTGSTAAAPAAA 228
           +S GG+AGN + N+ W+L A Y  GPL L  GYL    P  AA GG   T S     + A
Sbjct: 185 FSLGGVAGNFSQNKGWALAANYAQGPLSLSAGYLELNQPLQAALGG---TSSYIGDFSCA 241

Query: 229 VTSPIYAGFTSANTYQVIGAGGAYTFGAATIGATYSNIRF--GNLGASYASPFKGQSATF 286
                Y     A+  ++ GAGG+Y+FG A +  TY++ R       AS A P  G   +F
Sbjct: 242 NADASYCLLQDASKVRIFGAGGSYSFGKANVAVTYTHTRLSQSQYFASAARP-GGADVSF 300

Query: 287 NNAELNFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVY 346
           + AELN  Y L P L +G AY +    + +G+   + HQ  +G  Y LSKRT VY     
Sbjct: 301 DIAELNTTYALAPDLQLGLAYIF-NDVKPSGSGSTRVHQINLGAVYSLSKRTAVYAV--- 356

Query: 347 QHALGDTVTAGGAVVDATAG-------INGLSGSSNQNQFTARIGIRHKF 389
             A+G   +  G  VDA  G       I  +  S    Q +  +G+RH F
Sbjct: 357 --AIGQKSSGAGLGVDAVTGASENLAQIPNVVNSDTDRQVSVVVGLRHNF 404