Pairwise Alignments

Query, 389 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 375 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  266 bits (679), Expect = 9e-76
 Identities = 161/382 (42%), Positives = 209/382 (54%), Gaps = 13/382 (3%)

Query: 9   AALGAFAGVAHAQSSVTLYGIIDEGFNINTNSGGKHLYNLSSGVLQGSRFGLRGTEDLGG 68
           AAL   +G AHAQSSV LYG++  GF    N  G    + + G    SR+GL+G EDLGG
Sbjct: 6   AALVCQSG-AHAQSSVDLYGVLMSGFIWTNNVAGGKSVSPAEGP---SRWGLKGNEDLGG 61

Query: 69  GLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQ-FGTVTLGRQYDSVVDYVGPLEA 127
           G KA+F LE+GF +++G+  QGG +FGRQA+VGLS+   GT TLGRQYD   D++    A
Sbjct: 62  GTKAVFTLESGFAMSSGQSFQGGRLFGRQAFVGLSNDALGTFTLGRQYDFANDWLAQSSA 121

Query: 128 GDQWGGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGTYSFGGIAGNVTSNQIWS 187
             +W GY A HPGD DNFN  +R NN VKY S   GGL  G  YSFGG+AG+  +    S
Sbjct: 122 VYRWNGYFA-HPGDNDNFNWQFRVNNAVKYQSPVVGGLQIGAMYSFGGVAGSFGNESAMS 180

Query: 188 LGAGYNNGPLVLGVGYLNARTPAAAGGLFNTGSTAAAPAAAVTSPIYAGFTSANTYQVIG 247
            GA Y NGP  +   Y +   PA A    N  +T   P  +  SP  A   +  +  + G
Sbjct: 181 FGAKYENGPAKIQAAYFHMNHPALAASEGN-WNTMLFPHISAASPNEANALNPQSMDIYG 239

Query: 248 AGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQSATFNNAELNFKYQLTPALLVGAAY 307
            GG Y  G  T+G  +S+  +  LG           A F+N E N  Y LTP +    AY
Sbjct: 240 IGGTYQIGKTTLGLLWSHSDYDKLG-DQGDGLADADARFDNIEANIAYNLTPQVQFVGAY 298

Query: 308 DYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYVTGVYQHALGDTVTAGGAVVDATAGI 367
            YT G     +   QYHQ  VGV+YF+S RT +Y+ G+YQ A GD   A     +     
Sbjct: 299 AYTIGKVHPTDFAPQYHQVDVGVNYFVSHRTILYLAGIYQRAAGDATYA-----NIECAG 353

Query: 368 NGLSGSSNQNQFTARIGIRHKF 389
           +  + SS++NQ +A  GI H F
Sbjct: 354 SSCAASSSRNQVSALAGIFHMF 375