Pairwise Alignments

Query, 246 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

Subject, 244 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Rhodanobacter sp. FW510-T8

 Score =  178 bits (451), Expect = 1e-49
 Identities = 100/240 (41%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 3   RFFVGTPLQPEDVLPLPDDVVRHVL-VLRLQPGDSIVLFNGEGGEYSAELVEVERRSAMV 61
           R  V  PL       LP     HV  VLR+  GD + LFNG+G +Y A ++ V +R  +V
Sbjct: 5   RIHVDLPLAAGAERILPAQAGEHVARVLRMAAGDPLTLFNGDGNDYPATILAVGKREVVV 64

Query: 62  KIREFRDIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASSFVPLTTTRSVVRLSGDRA 121
           ++     +  E+P  LTLAQG+A G+KMD +++KA ELG +  VPL T R+ V+L   RA
Sbjct: 65  RVDGCHALANESPLPLTLAQGVARGEKMDLIVQKATELGVTRIVPLLTERAEVKLDAARA 124

Query: 122 QRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGSMPRTPEEGDLRILLSPRASISF 181
           ++R AHW+ +  ++CEQ GR RLPE++    +  WL  +     +G LR+ L P A  S 
Sbjct: 125 EKRLAHWRAVAASACEQSGRARLPEIVQALPLPAWLNGL---AADGALRLALLPEAGRSS 181

Query: 182 SALPSEPPKGRVTVLVGPEGGFSATEEAAAAAHGFTAVGLGPRVMRTETAGIAVLSALAA 241
             L      G   ++VGPEGG    +  A AA GF  + LGPR++RTETAG+A L+AL A
Sbjct: 182 RELRFGAAGG--LLVVGPEGGLGERDAGALAAAGFEGLRLGPRILRTETAGLAALAALQA 239