Pairwise Alignments

Query, 246 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

Subject, 239 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Pseudomonas fluorescens SBW25

 Score =  164 bits (414), Expect = 2e-45
 Identities = 91/245 (37%), Positives = 138/245 (56%), Gaps = 11/245 (4%)

Query: 1   MPRFFVGTPLQPEDVLPLPDDVVRHVL-VLRLQPGDSIVLFNGEGGEYSAELVEVERRSA 59
           + RFF  TPL   D   LP+    ++  VLR+  GD++ LF+G G E+   L+EV ++  
Sbjct: 3   LSRFFTDTPLSLGDH-ELPEAQAHYISRVLRMGEGDAVQLFDGSGQEFLGSLLEVGKKRV 61

Query: 60  MVKIREFRDIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASSFVPLTTTRSVVRLSGD 119
            V++ E    + E+P  + L QG++ G++MDW I+KA ELG ++  P+ + R  VRL  +
Sbjct: 62  TVQLTESVAGQAESPLHIHLGQGLSRGERMDWAIQKATELGVNAITPIFSDRCEVRLKDE 121

Query: 120 RAQRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGSMPRTPEEGDLRILLSPRASI 179
           RA +R  HW+ +  ++CEQCGR+ +P + P   +A WL        E DL+++L P A  
Sbjct: 122 RADKRLLHWRQVAISACEQCGRSTVPLIHPPLLLADWL-----KQTEADLKLVLHPVA-- 174

Query: 180 SFSALPSEPPKGRVTVLVGPEGGFSATEEAAAAAHGFTAVGLGPRVMRTETAGIAVLSAL 239
               + S      +  L+GPEGG +  E  AA   G+ A  LGPRV+RTETA +  L+  
Sbjct: 175 --EPMVSHAKPSSLAFLIGPEGGLTDAEVQAAQGAGYHAARLGPRVLRTETAPVVALAVA 232

Query: 240 AAGWG 244
              WG
Sbjct: 233 QQLWG 237