Pairwise Alignments

Query, 246 a.a., 16S rRNA methyltransferase from Burkholderia phytofirmans PsJN

Subject, 243 a.a., Ribosomal RNA small subunit methyltransferase E from Escherichia coli ECOR38

 Score =  172 bits (437), Expect = 4e-48
 Identities = 95/245 (38%), Positives = 144/245 (58%), Gaps = 8/245 (3%)

Query: 1   MPRFFVGTPLQPEDVLPLPDDVVRHV-LVLRLQPGDSIVLFNGEGGEYSAELVEVERRSA 59
           +PR +   PL     + L +D   H+  VLR+ PG ++ LF+G    + AE+    ++S 
Sbjct: 3   IPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSV 62

Query: 60  MVKIREFRDIEVEAPYRLTLAQGIAGGDKMDWLIEKAVELGASSFVPLTTTRSVVRLSGD 119
            VK+ E +  + E+P  + L Q ++ G+KM++ I+K++ELG S   PL + R  V+L  +
Sbjct: 63  EVKVLEGQLDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSE 122

Query: 120 RAQRRHAHWQGIVRASCEQCGRNRLPEVMPVREIATWLGSMPRTPEEGDLRILLSPRASI 179
           R  ++   WQ I  A+CEQCGRNR+PE+ P  ++  W        +EG L++ L PRAS 
Sbjct: 123 RLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQ----DEG-LKLNLHPRASN 177

Query: 180 SFSALPSEPPKGRVTVLVGPEGGFSATEEAAAAAHGFTAVGLGPRVMRTETAGIAVLSAL 239
           S + LP   P  RV +L+GPEGG SA E A  A + FT + LGPRV+RTET  +  ++AL
Sbjct: 178 SINTLPL--PVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITAL 235

Query: 240 AAGWG 244
              +G
Sbjct: 236 QVRFG 240