Pairwise Alignments
Query, 293 a.a., membrane protein from Burkholderia phytofirmans PsJN
Subject, 301 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113
Score = 81.3 bits (199), Expect = 3e-20
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 25/283 (8%)
Query: 10 MIVVVAWGVNFVVIKVGLHGVPPMLLGALRFALAAVPAVFFV--------KRPNLPWRWL 61
+++ + W +++ +K + ALR A+ V F+ RP P+++
Sbjct: 16 VVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGAL--VLFIVLLLRGRGMRPT-PFKYT 72
Query: 62 IAYGATISFGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAAMFLHERLRLPNVVGLL 121
+A + G A+ G AG +++ F+ +IFAA+FL ERLR +L
Sbjct: 73 LAIALLQTCGMVGLAQWALVSG-GAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAIL 131
Query: 122 VAAGGLAVIGVQGGHA--MTLAGFVLTLCAACSWALGNIVTKKV----GRVDLVALVVWG 175
+AA GL ++ +Q ++ +L + + SW IV K++ RVDL++L W
Sbjct: 132 IAAFGLFLV-LQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQ 190
Query: 176 SLIPPLPFFALSYALEGPQRIAAALSGISATSIFAIVYLAFIATLIGYGLWSRLLSRYPA 235
L L + AL PQR T +A+ Y A +AT + + LW +L PA
Sbjct: 191 MLYAALVMSVV--ALLVPQREI----DWQPTVFWALAYSAILATALAWSLWLFVLKNLPA 244
Query: 236 SQVAPFSLLVPIVGLASASLFLDEQLSAAQIAGALLVMAGLAV 278
S + +L VP+ G+ + L E A + +G +L++ LA+
Sbjct: 245 SIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALAL 287
Score = 33.9 bits (76), Expect = 5e-06
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 2 SPKDLLLAMIVVVAWGVNFVVIKVGLHGVPP-----------MLLGALRFALAAVPAVFF 50
S K +LA++ V+WG + +V K L+ P ML AL ++ A+
Sbjct: 150 SMKSAMLAILSGVSWGASAIVAK-RLYARHPRVDLLSLTSWQMLYAALVMSVVAL----L 204
Query: 51 VKRPNLPWR----WLIAYGATISFGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAAM 106
V + + W+ W +AY A ++ L+ + +PA +ASL A ++F+
Sbjct: 205 VPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWW 264
Query: 107 FLHERLRLPNVVGLLVAAGGLAVIGVQGGHAMTL 140
L E G+++ LA++ + A+++
Sbjct: 265 LLGENPGAVEGSGIVLIVLALALVSRKKKEAVSV 298