Pairwise Alignments

Query, 293 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 297 a.a., permease from Agrobacterium fabrum C58

 Score =  274 bits (701), Expect = 2e-78
 Identities = 137/282 (48%), Positives = 189/282 (67%)

Query: 1   MSPKDLLLAMIVVVAWGVNFVVIKVGLHGVPPMLLGALRFALAAVPAVFFVKRPNLPWRW 60
           M+   + LA+I V  WG NFV IKVG+  +PP+ L  +R+  AAVP VFF+ +PN+PWR 
Sbjct: 1   MALPHIFLALITVFLWGFNFVAIKVGVADMPPLFLTGVRYLFAAVPLVFFLPKPNVPWRH 60

Query: 61  LIAYGATISFGQFAFLFSAMYVGMPAGLASLVLQAQAFFTLIFAAMFLHERLRLPNVVGL 120
           +I YG  + F QF  L+ A+ +G+PAGLASLV+Q+QAFFTL  A +FL ER     + G 
Sbjct: 61  MIVYGMAMGFFQFGLLYPAIKLGLPAGLASLVMQSQAFFTLALAVVFLGERPLPSQIAGA 120

Query: 121 LVAAGGLAVIGVQGGHAMTLAGFVLTLCAACSWALGNIVTKKVGRVDLVALVVWGSLIPP 180
           +VA GGLAVIG++   A  L   ++ + +A +WA GNIV +++G+V++V+ + W SL+P 
Sbjct: 121 IVAFGGLAVIGMERMTAAALIPLLMGVGSAIAWACGNIVNRRIGQVNVVSFIAWTSLVPV 180

Query: 181 LPFFALSYALEGPQRIAAALSGISATSIFAIVYLAFIATLIGYGLWSRLLSRYPASQVAP 240
           LP   LS  +EGP  I   L   + T    ++Y+A+ AT++G G+WS LL RYPA  VAP
Sbjct: 181 LPLVLLSLVVEGPDAIVEGLQNATPTMALVVIYMAYGATIVGAGIWSYLLLRYPAGTVAP 240

Query: 241 FSLLVPIVGLASASLFLDEQLSAAQIAGALLVMAGLAVNVFG 282
           FSLLVPIVG  SA L   E ++  +I GA LV+ GLA+NVFG
Sbjct: 241 FSLLVPIVGFISAYLAFAEHITIFEIIGAALVILGLALNVFG 282