Pairwise Alignments

Query, 293 a.a., membrane protein from Burkholderia phytofirmans PsJN

Subject, 287 a.a., regulator protein pecM from Agrobacterium fabrum C58

 Score = 83.2 bits (204), Expect = 6e-21
 Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 23/295 (7%)

Query: 5   DLLLAMIVVVAWGVNFVVIKVGLHGVPPMLLGALRFALAAVPAVFFVKR--PNLPWRWLI 62
           D+L+  +    WG  + V    L    P+ +  LR   A +  +  V++    + W    
Sbjct: 10  DVLVTALAPAIWGTTYFVTTEFLPQGYPLHVAMLRALPAGILLLLLVRKLPQGIWWPRSF 69

Query: 63  AYGATISFGQFAFLFSAMYVG---MPAGLASLVLQAQAFFTLIFAAMFLHERLRLPNVVG 119
             GA      F+F ++ ++V    +P G+A+ V   Q    +  + +FL   +R   +  
Sbjct: 70  ILGAL----NFSFFWAMLFVSAYRLPGGVAATVGAVQPLIVIGLSRLFLSTPVRPLAIGA 125

Query: 120 LLVAAGGLAVIGVQGGHAMTLAGFVLTLCAACSWALGNIVTKKVGR-VDLVALVVWGSLI 178
             +   G+A++ +  G A+   G    L  A S A G ++T+K    V  +    W    
Sbjct: 126 GFLGIAGVALLVLTPGAALDGIGVAAGLAGAVSMAFGTVLTRKWRPPVSNLTFTAWQLTA 185

Query: 179 PPLPFFALSYALEGPQRIAAALSGISATSIFAIVYLAFIATLIGYGLWSRLLSRYPASQV 238
             +    ++YALE       AL   +A ++  + YL  I   + Y LW R L+R   S  
Sbjct: 186 GGILLLPVAYALE------PALPAPTAVNVMGMAYLGLIGAALTYLLWFRGLARIEPSAA 239

Query: 239 APFSLLVPIVGLASASLFLDEQLSAAQIAGALLVMAGLAVNVFGGWAVQRFSLTR 293
           A    L P+V      L L + L+ AQIAG + V+       F  W  QR  L R
Sbjct: 240 ASLGFLSPVVATLLGWLALGQSLAPAQIAGFIAVL-------FSIWLSQRSQLPR 287