Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 545 a.a., hypothetical protein from Paraburkholderia sabiae LMG 24235

 Score =  202 bits (513), Expect = 4e-56
 Identities = 155/478 (32%), Positives = 217/478 (45%), Gaps = 59/478 (12%)

Query: 187 AEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMG 246
           A EA    +   A  P     HF L  T     RH+EA+A ++ ALA+ PN+P     + 
Sbjct: 66  AAEAETISRACAALAPHHPGTHFQLGLTLQLMNRHSEAIAPYREALAIDPNVPSLRNNLA 125

Query: 247 NAL-AALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQA-------------------- 285
            AL +A   + E    L+ A+   P  A AW++L  +  A                    
Sbjct: 126 AALMSANPANPEVAVLLKAALQETPDDANAWINLAKSRLAGFDLDGALEAEERALELQPD 185

Query: 286 ----LGAHGPAVRALDQ----------ALRLRPDLASAHMNRALAWLAQRDFARGLPEYE 331
               LG HG  +R              A R  P  AS   N ++  L + ++A G  E+E
Sbjct: 186 NLIALGNHGQTLREAQHWDDAERFTLAAHRAAPGKASFVSNLSMLHLLRGNYADGWREHE 245

Query: 332 WRL----QTMAQPVIQTLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRA---- 383
            R     +   +  +   P W GE +A +TLL+  EQG GD LQF R+VP++A+R     
Sbjct: 246 ARWDGSKELAGKRPVMPGPTWRGESLAGKTLLLWGEQGMGDLLQFCRYVPVLAERVHREG 305

Query: 384 ARVVLEVQPQLLPLLAP--AAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQ 441
            R+V    PQ+  LLA   A  A + TL       P  D    LLSLPL L T  +TIP 
Sbjct: 306 GRLVWNSFPQMGALLARTLAQYADQFTLGGGVENLPTFDYEISLLSLPLLLETREETIPS 365

Query: 442 RTPYLSVPAAYGRKWRGSLGGQAKRKIGIAWSGRI--QQNETRSMQLAA-LDPLFALEGI 498
             PYL         WR  L G+ + K+G+ W+G    Q+N  R + L   +D    L+ +
Sbjct: 366 TVPYLQADPRGVDTWRQRLAGEKRLKVGLVWTGSHGHQRNPYRRVGLERYVDYFRELDDV 425

Query: 499 DWIVLQP----ELSAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSI 554
            +  LQP    E++A     LD     A+ + FD       DTAA +  LD V+S+ TS+
Sbjct: 426 AFYSLQPGAGAEVAAARTAGLDITDHTAAFNTFD-------DTAAYVSALDLVISVCTSV 478

Query: 555 AHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANAL 612
           AH++GAL +  W++L     W W    T SPWYP ATL RQ Q   W  V + +   L
Sbjct: 479 AHLSGALGQRTWVLLDVNPHWVWLLDRTDSPWYPSATLYRQAQFAQWEPVFDKLTRDL 536



 Score = 48.5 bits (114), Expect = 7e-10
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 1/162 (0%)

Query: 19  DAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNA 78
           +AE   RA     P H      LG+      +H+EA    R A+ + P   +L+ NL  A
Sbjct: 68  EAETISRACAALAPHHPGTHFQLGLTLQLMNRHSEAIAPYREALAIDPNVPSLRNNLAAA 127

Query: 79  LKALGQIDDAIE-QFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDA 137
           L +    +  +    + AL   P    A  NL  +  A    + A +A E++L LQPD+ 
Sbjct: 128 LMSANPANPEVAVLLKAALQETPDDANAWINLAKSRLAGFDLDGALEAEERALELQPDNL 187

Query: 138 SSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGM 179
            +  N G  L       +A           PG A  ++N+ M
Sbjct: 188 IALGNHGQTLREAQHWDDAERFTLAAHRAAPGKASFVSNLSM 229



 Score = 38.9 bits (89), Expect = 6e-07
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 16  RLDDAERGYRATLDGNPAHVDAL--HLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQL 73
           R  +A   YR  L  +P +V +L  +L   L      + E A L++ A+   P+DA   +
Sbjct: 99  RHSEAIAPYREALAIDP-NVPSLRNNLAAALMSANPANPEVAVLLKAALQETPDDANAWI 157

Query: 74  NLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQ 133
           NL  +  A   +D A+E    AL L P   +A  N G     A   +DA      + R  
Sbjct: 158 NLAKSRLAGFDLDGALEAEERALELQPDNLIALGNHGQTLREAQHWDDAERFTLAAHRAA 217

Query: 134 PDDASSHNNFGNALHAL 150
           P  AS  +N  + LH L
Sbjct: 218 PGKASFVSNL-SMLHLL 233