Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 531 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  236 bits (602), Expect = 2e-66
 Identities = 161/465 (34%), Positives = 234/465 (50%), Gaps = 16/465 (3%)

Query: 155 EAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANT 214
           +A+  F + + L P H   L   G  L  L + E ++   + AL   P  VAA  + +  
Sbjct: 68  QALHCFNQALHLAPEHEPTLIECGNLLFELEQFEFSLAHHEFALQLNPACVAALHSKSLI 127

Query: 215 FDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFAL 274
               GR+ EA+ S    +   P L PA+   G+ L  LGRH EAL   ++    D Q AL
Sbjct: 128 LSRLGRYEEALLSADHLVGYAPTLAPALLCRGSILHVLGRHHEALASYQQIPLADQQNAL 187

Query: 275 AWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRL 334
            +L+L   +  +     A     QAL L P   + H N AL  L   D+A+G   YE   
Sbjct: 188 FYLNLANLYLDMLDIDMASDCYRQALALEPHNPTLHWNLALFQLLTGDYAQGWAMYESGK 247

Query: 335 QTMAQP----VIQTLPRWHGEPIAE-RTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLE 389
                P         P W GE   + + +L++AEQG GDT+QF+R+   V+   A+V++E
Sbjct: 248 HAPHLPRGRRAACVQPMWTGEQSLQGKRILLYAEQGLGDTIQFIRYAKQVSALGAQVIIE 307

Query: 390 VQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVP 449
            Q  L+PLL      +   LIA G      D HC L+SLP    T    +P+ TPYL   
Sbjct: 308 AQTSLIPLLRSLGPDY--LLIAAGTAYQDYDYHCSLMSLPYIFKTELGNLPRHTPYLF-- 363

Query: 450 AAYGRKWRGSLGGQAKRKIGIAWSGRI--QQNETRSMQLAALDPLFALEGIDWIVLQPEL 507
           A+  +  R  +  Q + +IG+ WSG    Q++  RS+ LA L PL AL+   +  LQ E+
Sbjct: 364 ASPDKVSRLQMTDQNRLRIGLVWSGSTTHQKDRYRSIPLAQLAPLLALDA-SFHSLQKEV 422

Query: 508 SAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWL 567
              +  AL   P+   + +    + DF+DTAA+I R+D ++S+DTS+AH+AGA+ KP+W+
Sbjct: 423 RDTDLPALSELPQ---LTQHQAELEDFSDTAALIARMDLIISVDTSVAHLAGAMHKPVWI 479

Query: 568 MLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANAL 612
           +LP   D+RW      SPWYP A L R  +   W  V+  V  AL
Sbjct: 480 LLPDPPDFRWLLAREDSPWYPSARLFRAHEHD-WTSVITDVKQAL 523



 Score = 75.1 bits (183), Expect = 7e-18
 Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 24/246 (9%)

Query: 28  LDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDD 87
           L  NPA V A    G+L  QQ    +A     +A++L PE     +  GN L  L Q + 
Sbjct: 43  LASNPAGVQAWFQKGMLFKQQKNAPQALHCFNQALHLAPEHEPTLIECGNLLFELEQFEF 102

Query: 88  AIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNAL 147
           ++     AL L P+   A ++     +  GR+E+A  + +  +   P  A +    G+ L
Sbjct: 103 SLAHHEFALQLNPACVAALHSKSLILSRLGRYEEALLSADHLVGYAPTLAPALLCRGSIL 162

Query: 148 HALGRHTEAIAAFRR-TIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVA 206
           H LGRH EA+A++++  +  +      LN   + L+ L   + A  C++ ALA EP    
Sbjct: 163 HVLGRHHEALASYQQIPLADQQNALFYLNLANLYLDMLD-IDMASDCYRQALALEPHNPT 221

Query: 207 AHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAV 266
            H+NLA     TG +A+  A +++                      G+HA  LP   RA 
Sbjct: 222 LHWNLALFQLLTGDYAQGWAMYES----------------------GKHAPHLPRGRRAA 259

Query: 267 GLDPQF 272
            + P +
Sbjct: 260 CVQPMW 265



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 12/160 (7%)

Query: 31  NPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIE 90
           NPA V ALH   ++  + G++ EA       V   P  A   L  G+ L  LG+  +A+ 
Sbjct: 114 NPACVAALHSKSLILSRLGRYEEALLSADHLVGYAPTLAPALLCRGSILHVLGRHHEALA 173

Query: 91  QFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNF------- 143
            ++          + + NL N Y      + A+D + ++L L+P + + H N        
Sbjct: 174 SYQQIPLADQQNALFYLNLANLYLDMLDIDMASDCYRQALALEPHNPTLHWNLALFQLLT 233

Query: 144 -----GNALHALGRHTEAIAAFRRTIELRPGHAGALNNMG 178
                G A++  G+H   +   RR   ++P   G  +  G
Sbjct: 234 GDYAQGWAMYESGKHAPHLPRGRRAACVQPMWTGEQSLQG 273