Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score =  303 bits (775), Expect = 2e-86
 Identities = 213/614 (34%), Positives = 297/614 (48%), Gaps = 22/614 (3%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
           GRL+++   +++ L   P  V+AL  +  +  + G+ AEA E +RRAV  RP +A+LQ +
Sbjct: 146 GRLEESLEFHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQAD 205

Query: 75  LGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQP 134
           LG AL A G   +A      AL LAP  P       +   A GR E+A +   ++  L P
Sbjct: 206 LGRALLASGHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAP 265

Query: 135 DDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCF 194
           +   +       L A+GR   +   + R   +       L +   +LN + R  EA+  +
Sbjct: 266 NYPPAVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALY 325

Query: 195 QTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGR 254
           Q  LA E        NL N     G    A   ++ A  L P+ P  +      L +LGR
Sbjct: 326 QALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGR 385

Query: 255 HAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRA 314
            AEA     + V L P   +   +LG A  A G    A    D A            +RA
Sbjct: 386 VAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAGAADSTNDDIRFHRA 445

Query: 315 LAWLAQRDFARGLPEYE--WRLQTMAQPVIQ-TLPRWHG-EPIAERTLLVHAEQGFGDTL 370
           +  L   DFA G P YE  W  +  A+P      P+W G E +A +TLL+ +EQGFGDTL
Sbjct: 446 IVRLMLGDFAEGWPLYEARWGNRKRAEPNRHFATPQWLGDEDLAGKTLLLWSEQGFGDTL 505

Query: 371 QFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPLLSLPL 430
           QFVRF PL   R ARV+LEVQP L+ LL       +V  +A G      DL  PL+SLP+
Sbjct: 506 QFVRFAPLATARGARVILEVQPALVSLLRGMPGIAQV--VAVGDDTGPVDLQSPLMSLPM 563

Query: 431 ALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK--RKIGIAWSGRIQQNE-------- 480
           A G T ++IP   PYL+ P      W   L        +IG+ W+G  ++++        
Sbjct: 564 AFGITLESIPAAVPYLAPPPERLEPWTRRLNASLPPGPRIGLVWAGDSREHDIECTLIDR 623

Query: 481 TRSMQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAI 540
            RS+ L  L+P+ A+E   ++ LQ     ++ +     PR A +      I DFADTAA+
Sbjct: 624 RRSLALKQLEPILAVEEASFVSLQ---VGKQGLQARDEPRVADL---TAGITDFADTAAL 677

Query: 541 IERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGA 600
           I  LD V+S+DTS AH+A AL KP+WL+  F   WRW  G   SPWYP   L RQP  G 
Sbjct: 678 ISGLDLVISVDTSTAHLAAALGKPVWLLSRFDGCWRWLQGRDDSPWYPTLRLYRQPAAGD 737

Query: 601 WGDVVEAVANALRK 614
           W   +  +A  LR+
Sbjct: 738 WDTPLAKMATDLRE 751



 Score =  132 bits (333), Expect = 4e-35
 Identities = 104/344 (30%), Positives = 142/344 (41%), Gaps = 34/344 (9%)

Query: 5   FDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNL 64
           F +A   H+ GRL +A   Y+  L  NP    A HLLGV   Q GQ   A  L+  A+  
Sbjct: 34  FAKAVELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRA 93

Query: 65  RPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAAD 124
                   +NLGNAL +  ++ +A   +R ALTL    P A + LGN  A  GR E++ +
Sbjct: 94  NDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLE 153

Query: 125 AFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNAL 184
             + +L L+P+   +  N    L  LGR  EA+   RR +  RPG A    ++G +L A 
Sbjct: 154 FHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLAS 213

Query: 185 GRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAI-- 242
           G   EA      AL   P         A+   A GR  EA+     A  L PN PPA+  
Sbjct: 214 GHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLM 273

Query: 243 --------------------------------FGMGNALAALGRHAEALPYLERAVGLDP 270
                                           F   NAL  + R  EA+   +  +  + 
Sbjct: 274 LARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLAREH 333

Query: 271 QFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRA 314
             +  W +LG A + LG    A    + A RL PD      NRA
Sbjct: 334 DHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRA 377



 Score = 95.1 bits (235), Expect = 1e-23
 Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 6/260 (2%)

Query: 67  EDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAF 126
           ED A  + L  A    G++ +A+E ++  L   P    A++ LG A +  G+ + A    
Sbjct: 32  EDFAKAVELHQA----GRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLI 87

Query: 127 EKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGR 186
            +++R        H N GNAL +  R  EA AA+RR + L      AL  +G +L   GR
Sbjct: 88  GEAIRANDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGR 147

Query: 187 AEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMG 246
            EE++   Q+ALA  P FV A  N+A      GR AEAV   + A+A +P        +G
Sbjct: 148 LEESLEFHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLG 207

Query: 247 NALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDL 306
            AL A G   EA   + RA+ L P      ++     +A G    A+    +A  L P+ 
Sbjct: 208 RALLASGHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNY 267

Query: 307 ASA--HMNRALAWLAQRDFA 324
             A   + R L  + +RD +
Sbjct: 268 PPAVLMLARQLRAMGRRDLS 287



 Score = 57.0 bits (136), Expect = 3e-12
 Identities = 39/124 (31%), Positives = 58/124 (46%)

Query: 4   VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
           +FD A A +   RL +A   Y+A L     H +  + LG    + G+   AAE    A  
Sbjct: 305 LFDAANALNEMSRLPEAVALYQALLAREHDHSEVWNNLGNALRELGELDRAAECYETAER 364

Query: 64  LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
           L P+D  +  N    L +LG++ +A    R  + L P   +   NLG A  A GR E+A 
Sbjct: 365 LSPDDPVVMSNRAALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAR 424

Query: 124 DAFE 127
           + F+
Sbjct: 425 EQFD 428