Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 340 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  179 bits (455), Expect = 1e-49
 Identities = 129/342 (37%), Positives = 167/342 (48%), Gaps = 19/342 (5%)

Query: 273 ALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEW 332
           A A +  G    A   +  AVR   Q   LR  L    M R        D+ RGLP  E+
Sbjct: 8   AFARIEAGDLDGAEEVYRQAVRDGAQDPLLRMCLGQLLMLRG-------DYRRGLPLNEF 60

Query: 333 RLQTMAQPVIQTLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQP 392
           R      PV  T  RW G+P+   T+L+  EQGFGD +QFVR+   +A+R ARVV+  Q 
Sbjct: 61  R---PLSPVAGT--RWRGQPLKGETVLILGEQGFGDNIQFVRYAEPLARRGARVVVGCQT 115

Query: 393 QLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAY 452
            +  LL+ A    +V    QG  RP  DL  PL+SLP   GTT  TIP R PYL+   A 
Sbjct: 116 GIGRLLSTAPGVSQVVESGQGMDRP--DLVIPLMSLPYVFGTTVQTIPARVPYLTAEPAA 173

Query: 453 GRKWRGSLGGQAKRKIGIAWSGRIQQ--NETRSMQLAALDPLFALEGIDWIVLQPELSAE 510
              WR  L   A  K+G+ W G  +   +  RS  L     L  L G+ +  LQ   +A 
Sbjct: 174 VAVWRERLSPYAGLKVGLVWGGNPEAAYDARRSPGLDPYLGLLDLPGVTFFSLQKGPAAA 233

Query: 511 ERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLP 570
              AL      A+       + DF  +AA++E LD V+S  TS AH+AGAL +P+W++L 
Sbjct: 234 ---ALAGRSMPANFVDLGPELTDFDQSAAVMESLDLVISSCTSPAHLAGALGRPVWVVLA 290

Query: 571 FAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANAL 612
              DWRW      SPWYP A L R  +   W  V+  V  AL
Sbjct: 291 SFPDWRWLLEREDSPWYPTARLFRAGRGEGWDPVLGRVRTAL 332