Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 527 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  218 bits (555), Expect = 5e-61
 Identities = 174/521 (33%), Positives = 237/521 (45%), Gaps = 43/521 (8%)

Query: 121 DAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMS 180
           D+A  FEK+L       ++  N        G    A     R I   P HA AL   G+ 
Sbjct: 4   DSALPFEKTL-------NAWFNQAEEARLAGEFDTARTLLDRIIGQDPAHADALYTYGLV 56

Query: 181 LNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGR-HAEAVASFKAALALQPNLP 239
             A  + E A    + AL  E R   A++          R +A A+ + +  LAL+P   
Sbjct: 57  ALASNQLESAQSWVERAL--EVRSDPAYYGTLCIVQIKLRDYARALQTAECGLALEPASL 114

Query: 240 PAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQA 299
           P  F M   L   GR  +A     R + L P    A ++LG   + LG+   A R L QA
Sbjct: 115 PLNFFMAVILQVQGRSDDAAVAYHRLLELRPDHPQALVNLGVVVKDLGSLSEAERHLRQA 174

Query: 300 LRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMA---------QPVIQTLPRWHG 350
           + L P    A  + +   LA   +    P +E R              +P +  LP+W G
Sbjct: 175 IALAPSYLGARASLSQVLLAAGRYEEAWPYFEDRWANFVDADGRPASVRPTLP-LPQWKG 233

Query: 351 E-----------PIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLA 399
           E           P     LLV  EQG GD+LQFVR++P+  +R ARV     P L  L  
Sbjct: 234 ERLDIASASQGMPEYGARLLVIPEQGHGDSLQFVRYLPMALERFARVGYICPPSLRRLYE 293

Query: 400 PA-AQAWRVTLIAQGAPRPAA-DLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWR 457
            + A    + ++  G    +  D HCPL+SLP+A GT  D IP  T YL   AA    WR
Sbjct: 294 ESFAHLPGLMMLDDGLSDLSDWDWHCPLMSLPMAFGTRLDNIPAAT-YLHADAARSASWR 352

Query: 458 GSLG---GQAKRKIGIAWSGR---IQQNETRSMQLAALDPLFALEGIDWIVLQPELSAEE 511
             L         ++G+ W+G    + ++  RS+  A + PL AL  + WI LQ      +
Sbjct: 353 ARLAMLPDAGLPRVGLVWAGGHSGLTEDRARSLNPAQVAPLLALPNVRWISLQKTDDPAK 412

Query: 512 RMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPF 571
           R    TH   A +  +     DFADTAA+I+ LD V+S+DTS+AH+A A+ KP+WL+  F
Sbjct: 413 RADAVTH---APLTDWMDDATDFADTAALIDNLDLVISVDTSVAHLAAAMGKPVWLLNRF 469

Query: 572 AADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANAL 612
           A  WRW      SPWYP   L  Q Q G W  V+E VA AL
Sbjct: 470 AGCWRWLRDRDDSPWYPSVRLFTQLQRGDWDGVLERVAEAL 510



 Score = 75.5 bits (184), Expect = 5e-18
 Identities = 65/224 (29%), Positives = 96/224 (42%), Gaps = 26/224 (11%)

Query: 5   FDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNL 64
           F++A  A   G  D A       +  +PAH DAL+  G++     Q   A   V RA+ +
Sbjct: 17  FNQAEEARLAGEFDTARTLLDRIIGQDPAHADALYTYGLVALASNQLESAQSWVERALEV 76

Query: 65  RPEDA------ALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGR 118
           R + A       +Q+ L +  +AL       +     L L P+    ++ +       GR
Sbjct: 77  RSDPAYYGTLCIVQIKLRDYARAL-------QTAECGLALEPASLPLNFFMAVILQVQGR 129

Query: 119 HEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMG 178
            +DAA A+ + L L+PD   +  N G  +  LG  +EA    R+ I L P + GA  ++ 
Sbjct: 130 SDDAAVAYHRLLELRPDHPQALVNLGVVVKDLGSLSEAERHLRQAIALAPSYLGARASLS 189

Query: 179 MSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHA 222
             L A GR EEA P F+                AN  DA GR A
Sbjct: 190 QVLLAAGRYEEAWPYFED-------------RWANFVDADGRPA 220