Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 545 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  209 bits (531), Expect = 3e-58
 Identities = 161/498 (32%), Positives = 230/498 (46%), Gaps = 58/498 (11%)

Query: 166 LRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAV 225
           +RP    +L+++   L    R+ +AI         +PR   AHF L  +     RHAEA+
Sbjct: 44  IRPLDHASLDSLVAKLLEEHRSGDAIELAAIIAQLDPRNALAHFRLGYSLQMAKRHAEAI 103

Query: 226 ASFKAALALQPNLPPAIFGMGNALAALGRHA-EALPYLERAVGLDPQFALAWLSLGTAHQ 284
           A ++ ALA++P LP     +  AL   G    E +  LE AV  DP     W +L  A++
Sbjct: 104 APYRQALAIEPRLPRLRNNLAAALTFTGGDLNERIALLENAVRDDPDEGDGWTNLTHAYR 163

Query: 285 -------ALGA---------HGP------------------AVRALDQALRLRPDLASAH 310
                  AL A         H P                  A++A   A  L P+ AS  
Sbjct: 164 TKMDLPRALEAGAKAMQCAPHSPLAHNNYALTLREAQRWDDAMQAAQTACALAPNDASMR 223

Query: 311 MNRALAWLAQRDFARGLPEYEWRLQTMAQ-----PVIQTLPRWHGEPIAERTLLVHAEQG 365
            N ++  L + D+  G   +E R    A+     P++   P W GEP+A +TLLV  EQG
Sbjct: 224 SNLSMLQLVRADYEHGWASHEARWDGSAELGGNRPMMPA-PLWRGEPLARKTLLVWGEQG 282

Query: 366 FGDTLQFVRFVPLVAQRA----ARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPR--PAA 419
            GD LQF R++P++A+R      R++    PQ+  LL  +         A G     P+ 
Sbjct: 283 MGDLLQFCRYIPMLAERVHREGGRLIWNSFPQMGALLKRSLGGHADEFSAGGGVETLPSF 342

Query: 420 DLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKRKIGIAWSGRI--Q 477
           D   PLLSLPL   T   TIP   PYL    A  + W+  L G+++ K+G+ W+G    Q
Sbjct: 343 DYEIPLLSLPLIFDTHEATIPA-APYLRADPAGTKSWQERLAGESRLKVGLTWTGSHGHQ 401

Query: 478 QNETRSMQLAALDPLFA-LEGIDWIVLQPELSAEERMALDTHPRAASIHRFDK--RIGDF 534
           +N  R +        F  +  + +  LQP   A+   A     RAA +   D   +   F
Sbjct: 402 RNPFRRVGWERYAAHFGGMRDVAFYSLQPGAGADVTAA-----RAAGLPMTDHTAKFATF 456

Query: 535 ADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVR 594
            DTAA +  LD V+++ TS AH++GA+ +  W++L     W W      SPWYP ATL R
Sbjct: 457 DDTAAFVGALDLVITVCTSAAHLSGAIGQRTWVLLDVNPHWVWLLDRHDSPWYPSATLYR 516

Query: 595 QPQPGAWGDVVEAVANAL 612
           QPQ G W   +EAVA  L
Sbjct: 517 QPQFGEWEPALEAVARDL 534



 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 4/181 (2%)

Query: 33  AHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIEQF 92
           A +D+L    +  H+ G   E A ++ +   L P +A     LG +L+   +  +AI  +
Sbjct: 50  ASLDSLVAKLLEEHRSGDAIELAAIIAQ---LDPRNALAHFRLGYSLQMAKRHAEAIAPY 106

Query: 93  RNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAF-EKSLRLQPDDASSHNNFGNALHALG 151
           R AL + P  P    NL  A    G   +   A  E ++R  PD+     N  +A     
Sbjct: 107 RQALAIEPRLPRLRNNLAAALTFTGGDLNERIALLENAVRDDPDEGDGWTNLTHAYRTKM 166

Query: 152 RHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNL 211
               A+ A  + ++  P    A NN  ++L    R ++A+   QTA A  P   +   NL
Sbjct: 167 DLPRALEAGAKAMQCAPHSPLAHNNYALTLREAQRWDDAMQAAQTACALAPNDASMRSNL 226

Query: 212 A 212
           +
Sbjct: 227 S 227



 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 52/196 (26%), Positives = 75/196 (38%), Gaps = 1/196 (0%)

Query: 43  VLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSF 102
           V   Q G     A+ +  A  +RP D A   +L   L    +  DAIE       L P  
Sbjct: 23  VAARQTGTAQADADCLDAAARIRPLDHASLDSLVAKLLEEHRSGDAIELAAIIAQLDPRN 82

Query: 103 PMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRH-TEAIAAFR 161
            +AH+ LG +   A RH +A   + ++L ++P      NN   AL   G    E IA   
Sbjct: 83  ALAHFRLGYSLQMAKRHAEAIAPYRQALAIEPRLPRLRNNLAAALTFTGGDLNERIALLE 142

Query: 162 RTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRH 221
             +   P       N+  +         A+     A+   P    AH N A T     R 
Sbjct: 143 NAVRDDPDEGDGWTNLTHAYRTKMDLPRALEAGAKAMQCAPHSPLAHNNYALTLREAQRW 202

Query: 222 AEAVASFKAALALQPN 237
            +A+ + + A AL PN
Sbjct: 203 DDAMQAAQTACALAPN 218