Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 430 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  198 bits (504), Expect = 3e-55
 Identities = 148/458 (32%), Positives = 208/458 (45%), Gaps = 46/458 (10%)

Query: 164 IELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAE 223
           +E +P      + +G  L   G+ E AI C + AL  + R V A  NL            
Sbjct: 6   LEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNL------------ 53

Query: 224 AVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAH 283
                                 GN L  + ++A+A+   E AV L    A    +L  A 
Sbjct: 54  ----------------------GNVLGDVEQYADAIAAQEHAVVLSGGNANLLSNLVVAL 91

Query: 284 QALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMA-QPVI 342
           +       A+  LD ALR RP+      +RAL  L    +A G  +Y+ RL   + Q  I
Sbjct: 92  RHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVGRYAEGFRDYDSRLSLPSYQNRI 151

Query: 343 QTLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAA 402
                W G P+  +T+L+  EQGFGD L   R+ P+V  R  RV+LE  P+L  LL+   
Sbjct: 152 ADGTMWDGGPLDGKTILLTTEQGFGDVLLTARYAPMVKARGGRVLLECHPELHRLLSGLE 211

Query: 403 QAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGG 462
                  +  G P P  D+HCPL+SLP  LGTT DT+P  T       A  +  R   G 
Sbjct: 212 GI--DGFVRAGTPYPPYDVHCPLMSLPHRLGTTIDTVPPPTRLTVTAEAREKAARLVPGP 269

Query: 463 QAKRKIGIAWSGRI--QQNETRSMQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPR 520
               K+GI WSGR+  + N  R+  L+       +  +    +Q      E   L+T   
Sbjct: 270 DGTIKVGIIWSGRVTFKDNARRATTLSRFLRFLNVPNVRLYSIQKGPPEAE---LETLGT 326

Query: 521 AASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAG 580
           +  I    +   DFADTAA++ERLD V+  D+S+AH+AG+L +P+W +L F   W +  G
Sbjct: 327 STLITPLGQHFNDFADTAAVLERLDLVIMTDSSVAHLAGSLGRPVWNLLQFMPYWVYGDG 386

Query: 581 E----TGSPWYPGATLVRQPQPGAWGDVVEAVANALRK 614
           +      +PWYP   L RQ  PG W  V  A   ALR+
Sbjct: 387 KGEWADTTPWYPSMRLFRQTTPGDWDSVFAAAEQALRQ 424



 Score = 52.0 bits (123), Expect = 5e-11
 Identities = 37/135 (27%), Positives = 59/135 (43%)

Query: 100 PSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAA 159
           P  P     LG     AG+ E A     ++L +      +  N GN L  + ++ +AIAA
Sbjct: 10  PRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIAA 69

Query: 160 FRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATG 219
               + L  G+A  L+N+ ++L    R   A+     AL A P      ++ A T    G
Sbjct: 70  QEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVG 129

Query: 220 RHAEAVASFKAALAL 234
           R+AE    + + L+L
Sbjct: 130 RYAEGFRDYDSRLSL 144



 Score = 48.1 bits (113), Expect = 7e-10
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 127 EKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGR 186
           E  L  +P D +  +  G  L   G+   AIA  RR +E+   H GA  N+G   N LG 
Sbjct: 3   EGMLEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLG---NVLGD 59

Query: 187 AEEAIPCFQTALAAEPRFV---AAHFNLANTFDATGRHA----EAVASFKAALALQPNLP 239
            E+    +  A+AA+   V     + NL +      RH      A+     AL  +PN P
Sbjct: 60  VEQ----YADAIAAQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDP 115

Query: 240 PAIFGMGNALAALGRHAE 257
             ++     L  +GR+AE
Sbjct: 116 GLLWDRALTLLQVGRYAE 133



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 36/135 (26%), Positives = 58/135 (42%)

Query: 65  RPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAAD 124
           +P D  +   LG  L+  G+ + AI   R AL +      A  NLGN      ++ DA  
Sbjct: 9   KPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIA 68

Query: 125 AFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNAL 184
           A E ++ L   +A+  +N   AL    R   A+      +  RP   G L +  ++L  +
Sbjct: 69  AQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQV 128

Query: 185 GRAEEAIPCFQTALA 199
           GR  E    + + L+
Sbjct: 129 GRYAEGFRDYDSRLS 143



 Score = 42.0 bits (97), Expect = 5e-08
 Identities = 36/139 (25%), Positives = 55/139 (39%)

Query: 28  LDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDD 87
           L+  P   +    LG L  Q G+   A    RRA+ +         NLGN L  + Q  D
Sbjct: 6   LEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYAD 65

Query: 88  AIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNAL 147
           AI    +A+ L+        NL  A     R   A +  + +LR +P+D     +    L
Sbjct: 66  AIAAQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTL 125

Query: 148 HALGRHTEAIAAFRRTIEL 166
             +GR+ E    +   + L
Sbjct: 126 LQVGRYAEGFRDYDSRLSL 144



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 31/118 (26%), Positives = 50/118 (42%)

Query: 15  GRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLN 74
           G+ + A    R  L+ +  HV A   LG +     Q+A+A      AV L   +A L  N
Sbjct: 27  GKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIAAQEHAVVLSGGNANLLSN 86

Query: 75  LGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRL 132
           L  AL+   + + A+E    AL   P+ P   ++        GR+ +    ++  L L
Sbjct: 87  LVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQVGRYAEGFRDYDSRLSL 144