Pairwise Alignments
Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN
Subject, 1246 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 207 bits (526), Expect = 3e-57
Identities = 193/616 (31%), Positives = 262/616 (42%), Gaps = 50/616 (8%)
Query: 7 RAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRP 66
RA A G L DAE ++A P V+AL LG LR +G AEA E A L P
Sbjct: 663 RALARQEMGALADAEADWQAAAALAPEDVEALGNLGALRLSRGAAAEAMEATDAARRLAP 722
Query: 67 EDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNL-GNAYAAAGRHEDAADA 125
A L +N G A +A+G AL L P+ A L A R +A
Sbjct: 723 FHAGLWINAGLARQAMGGAGRPF--LMRALALDPAVAEAWTALSAEALRNPDRAAEAERT 780
Query: 126 FEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALG 185
++L L+P D ++ +N G A AL R EA+A R ++ RPG L N+ ++L G
Sbjct: 781 ARRTLHLRPGDPAAVSNLGLAALALDRPAEAVAHLRLALQGRPGDLATLGNLALALERAG 840
Query: 186 RAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGM 245
A + + P A LA+ GR A+ + ALAL+P +
Sbjct: 841 DGAAAGLAWWRVILFAPGTGAGWAGLADLRQRQGRLDAALKGWGRALALEPGRAEWRYNQ 900
Query: 246 GNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPD 305
GNAL A GR EA +AV DP LA + G A A G D
Sbjct: 901 GNALHAAGRPVEADAAYRQAVEDDPALTLAAFNRGYAALAQG-----------------D 943
Query: 306 LASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQTLPRWHGEPIAERTLLVHAEQG 365
LA+ + A + LP+ +R +P W G + +TLLV EQG
Sbjct: 944 LAAGWTGLEARFAA----GQALPDRRFR-----------MPAWEGGELTGKTLLVWREQG 988
Query: 366 FGDTLQFVRFVPLVAQR----AARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADL 421
GD L P + R A RV++E +P+L L A + + T+ A AD
Sbjct: 989 VGDELMHSACYPDLIARTLSGAGRVIVECEPRLAALFARSFP--QATVRAATEDPADADC 1046
Query: 422 HCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKR-KIGIAWSGRIQ--Q 478
H P SLPL LG ++ + +L A +WRG LGG +G+ W ++
Sbjct: 1047 HVPAGSLPLQLGWGLESFATQGGWLRADEAAVERWRGWLGGTGSALTVGLCWRSGLRGAL 1106
Query: 479 NETRSMQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHR--FDKRIGDFAD 536
+ L P+ L G+ I LQ + E +A +IHR D + D
Sbjct: 1107 RDANYAPLTDWAPILTLPGLRLITLQYD-ECEAELADAERRFGIAIHRPPLDLK-NDLDG 1164
Query: 537 TAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQP 596
AA+ LD V+S TS+A +AGAL P+W + P A DW G PWYP LV
Sbjct: 1165 AAALTAALDLVISAGTSVAEMAGALGVPVWRIGP-AGDWT-ALGTGCRPWYPSMRLVCPE 1222
Query: 597 QPGAWGDVVEAVANAL 612
Q G GD + A AL
Sbjct: 1223 QGGTLGDALGAAGRAL 1238
Score = 193 bits (491), Expect = 3e-53
Identities = 190/625 (30%), Positives = 255/625 (40%), Gaps = 85/625 (13%)
Query: 8 AFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPE 67
A A HR G LD AER YRA L + + DALHLLGVL HQ+GQ A+A L+ +AV RP
Sbjct: 20 ALAHHRAGDLDGAERTYRAMLAADGRNADALHLLGVLHHQRGQDADAVRLIGQAVARRPG 79
Query: 68 DAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
A NLG AL ALG++ +A ++R AL L ++ AH +LG+A R +A +
Sbjct: 80 VADQHANLGLALHALGRLAEAEAEYRRALALRDAYAEAHNSLGSALQDQDRLAEAGVHYR 139
Query: 128 KSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRA 187
++L L A + N G L A + EA A R + L PGHA AL N+G+ L GR
Sbjct: 140 RALDLNARYAEAWANLGTLLRAQDDYAEAETALRHALRLDPGHATALTNLGVVLKETGRP 199
Query: 188 EEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGN 247
EA AL P NLA +A GR EA A + AL P A + +
Sbjct: 200 AEAEAAHLGALRLAPGDAETMVNLALLREAQGRGDEAEALYAQALIHAPGFALARWNLAL 259
Query: 248 ALAALGRHAEA-----LPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRL 302
L GR A+ + R V F+L S T A G
Sbjct: 260 RLLGRGRLADGWEEYEARFASRRVSAGRSFSLPAFSEWTWDGAPG--------------- 304
Query: 303 RPDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQTLPRWHGEPIAERTLLVHA 362
R L W Q GL G+ + T L
Sbjct: 305 ---------RRLLVWREQ-----GL----------------------GDELMFGTALPDL 328
Query: 363 EQGFGDTLQFV----RFVPLVAQRAARVVLEVQ---PQLLPLLAPAAQAWRVTLIAQGAP 415
+ FG + V R LV + + Q P P AP AP
Sbjct: 329 AERFGPEMLVVEVDARLTGLVGRALPGATVRAQTADPAPAPAPAP-------------AP 375
Query: 416 RPA-ADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK-RKIGIAWS 473
PA AD H P+ SLP L + P R +L+ +WR L ++G+ W
Sbjct: 376 APADADAHLPMGSLPQLLRSGLADFPARPSWLAPDPLRLAEWRDRLAALGPGLRVGLCWG 435
Query: 474 GRIQQNETRS--MQLAALDPLFALEGIDWIVLQPELSAEERMALDTHPRAASIHRF--DK 529
+ E ++ LA PL L G+ + LQ + E A++ I R+
Sbjct: 436 SQNMLGERKASYTTLAGWAPLLTLPGLIPVTLQYDGREAEIAAVEAQ-LGLRIRRWPGTD 494
Query: 530 RIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPG 589
D AA+I LD VV++ +S+ +AGAL P+W P A DW G PW+P
Sbjct: 495 LKNDLEGVAALIAGLDLVVTVASSVGEMAGALGVPVWRFGP-AGDWT-ALGTGVRPWFPS 552
Query: 590 ATLVRQPQPGAWGDVVEAVANALRK 614
L DV+ +A LR+
Sbjct: 553 MRLWSARPGEGLPDVLARMAAELRR 577
Score = 48.1 bits (113), Expect = 2e-09
Identities = 48/152 (31%), Positives = 66/152 (43%)
Query: 173 ALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAAL 232
AL ++ + G + A ++ LAA+ R A L G+ A+AV A+
Sbjct: 15 ALLREALAHHRAGDLDGAERTYRAMLAADGRNADALHLLGVLHHQRGQDADAVRLIGQAV 74
Query: 233 ALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPA 292
A +P + +G AL ALGR AEA RA+ L +A A SLG+A Q A
Sbjct: 75 ARRPGVADQHANLGLALHALGRLAEAEAEYRRALALRDAYAEAHNSLGSALQDQDRLAEA 134
Query: 293 VRALDQALRLRPDLASAHMNRALAWLAQRDFA 324
+AL L A A N AQ D+A
Sbjct: 135 GVHYRRALDLNARYAEAWANLGTLLRAQDDYA 166