Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 677 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2

 Score =  260 bits (665), Expect = 1e-73
 Identities = 208/647 (32%), Positives = 292/647 (45%), Gaps = 50/647 (7%)

Query: 7   RAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRP 66
           +A   H+ GRL +A+  YR  L   P   DALHLLG++  Q G+  +AA+L+ +AV  R 
Sbjct: 31  QAVPLHQSGRLAEADALYRQALAAQPRQPDALHLLGMIACQTGRFTDAADLIGQAVAARR 90

Query: 67  EDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAF 126
           +      NL  AL+ALG+  +A    RNAL L   FP A   LGNA  A G+ E+AADA+
Sbjct: 91  DVPDYHANLAYALQALGRSAEAERAARNALRLRRPFPEAANTLGNALNAQGKAEEAADAY 150

Query: 127 EKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGR 186
             +LR +PD A +  N G  L +LGR  EA    R  +   P    A   +G++L  LGR
Sbjct: 151 RAALRARPDYAEAEGNLGTVLRSLGRSAEAEPLLRHAVAANPSLLEAHAALGLALLDLGR 210

Query: 187 AEEAIPCFQTALAAEPRFVAAHFNLANTF--------------------DATGRHAEAVA 226
           +EE     +  LA  P    A   LA +                     DA G +A  +A
Sbjct: 211 SEEGETALRAVLARRPDHAPAALALAGSLQRRGADALPAHRRHLMLEPADAEGWNAHGLA 270

Query: 227 ------------SFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFAL 274
                       +F  AL L P +  A+  +G      GR  E+     RA+ L P +A 
Sbjct: 271 LQVADRIAPAGDAFTRALRLAPTMAEAMTNLGTVRRLQGRIVESADLQRRALDLRPGYAA 330

Query: 275 AWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEWRL 334
           A  +L  A Q LG    A R    AL   P  A A  NR+L  L Q   A G  +Y  R 
Sbjct: 331 AHTNLALALQDLGDEAAAEREFTLALDADPAQALARFNRSLLQLRQGRLAEGWEDYAVRF 390

Query: 335 QT--MAQPVIQTLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQP 392
           ++  +       +P W G  +A R LL+ AEQG GD L F   +P    R    ++E +P
Sbjct: 391 ESGRLKPKHPLNIPEWDGGDLAGRRLLLWAEQGLGDELMFGALLPEALARFPGTIVECEP 450

Query: 393 QLLPLLAPAAQAWRVTLIAQGAPRPA-ADLHCPLLSLPLALGTTFDTIPQRTPYLSVPAA 451
           +L+PL     +++  T +     RPA AD H    SLP  L  T    P    +L     
Sbjct: 451 RLVPLF---QRSFPGTTVRGPTRRPADADCHLGFGSLPRLLWPTAPLTPPPVGWLKPDPM 507

Query: 452 YGRKWRGSLGGQAK-RKIGIAWSGRIQQNETRS--MQLAALDPLFALEGIDWIVLQPELS 508
               WR  L       KIGIAW+ +    E R    +L    PL  L G+  + LQ +  
Sbjct: 508 RVAAWRSRLEALGPGLKIGIAWTSQRLTTERRQSYTELEDWAPLLRLPGLHAVSLQYD-G 566

Query: 509 AEERMALDTHPRAASIHRFD--KRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLW 566
            E  +A         +HR+    +I D   TAA++  LD VV++ +S   +A AL  P+W
Sbjct: 567 REAEIAAIEQRLGVCVHRWPDLDQIADLEGTAALMANLDLVVTVASSAGEMAAALGTPVW 626

Query: 567 LMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANALR 613
            +     DW    G    PW+P    +R  QP A  ++ +A+  A++
Sbjct: 627 RL--GRRDWTQL-GTAVRPWFPS---MRCIQPDAGDNIKDAIRKAVQ 667