Pairwise Alignments
Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN
Subject, 2017 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2
Score = 206 bits (524), Expect = 8e-57
Identities = 193/604 (31%), Positives = 270/604 (44%), Gaps = 34/604 (5%)
Query: 19 DAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNA 78
DAE R L P D LG L + +G H A ++ AV P A L + G A
Sbjct: 190 DAEACLRRALQDAPGDKDLSLELGALLNSRGDHEAACGVLAAAVAAHPGIAQLHFSYGTA 249
Query: 79 LKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDAS 138
L+ ++ +A+ QFR AL P+ A NLG A G A +++ L P DA
Sbjct: 250 LQGTRRLREAVVQFRLALDREPAMQGACNNLGVALLELGEMGPATLVLSRAVALSPGDAM 309
Query: 139 SHNNFGNAL---HALGRHTEAIAA-FRRTIELRPGHAGALNNMGMSLNALGRA-EEAIPC 193
NN G +L + L +E A +RR + LRP + AL N+ ++ L R A
Sbjct: 310 VVNNHGTSLENRYDLEADSERPARWYRRALRLRPDYGKALVNLA-GIHILRRELHHAERL 368
Query: 194 FQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALG 253
++ A A+PR V NL ++A ++ ALA+ P A+ G G L LG
Sbjct: 369 YRRAAVADPRSVETFVNLGGLLLDRDDLSQAGRMYRRALAIDAGSPSALTGYGLVLQRLG 428
Query: 254 RHAEALPYLERAVGLDPQFALAWLSLGT----AHQALGAHGPAVRALDQALRLRPDLASA 309
R EA RA+ +D + A A +LG HQ A P +D AL + P L +A
Sbjct: 429 RIGEAEAAHRRALEIDGRHAEAAGNLGMMLWQCHQDDTAAEPW---MDLALSVNPSLNTA 485
Query: 310 HMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQ-TLPRWHGEPIAERTLLVHAEQGFGD 368
H+NR + L++ D G Y R + P W GE A R LLV EQG GD
Sbjct: 486 HLNRGMLRLSRGDLPGGWDGYRRRFWAKGYVNRRIAAPLWQGENSAGRRLLVWREQGVGD 545
Query: 369 TLQFVRFVPLVAQRAARVVLEVQPQLLPLLA---PAAQAWRVTLIAQG---APRPAADLH 422
+ F P + RA VV+E +L+PL A P A ++ A+G P D H
Sbjct: 546 EIMFASCYPSLIGRAGHVVIECDRRLVPLFARSFPRATVRAESVDARGDETIQPPDVDAH 605
Query: 423 CPLLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK-RKIGIAWSGRIQQNET 481
P LP L + + P+L A ++WR L ++GI W ++ +E
Sbjct: 606 VPAGDLPGRLRASLSGFDGQAPWLVPDPALVKRWRERLAALGSGLRVGIGWRSQMMTSE- 664
Query: 482 RSMQLAALD---PLFALEGIDWIVLQ-PELSAEERMALDTHPRAASIHRF-DKRI-GDFA 535
R+ LD PLFA+ G+ ++ LQ E AE R A + +IHR+ D + DF
Sbjct: 665 RTPAYVMLDQWGPLFAVPGLTFVNLQYGECEAEIRAAEERF--GVTIHRWADLNLKDDFD 722
Query: 536 DTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQ 595
AA+ LD V+S S +AGAL P+W + DW G PW+P L Q
Sbjct: 723 GAAALTANLDLVISPAMSAGELAGALGLPVWRF--GSRDWTQL-GTEARPWFPTMRLF-Q 778
Query: 596 PQPG 599
P G
Sbjct: 779 PTTG 782
Score = 194 bits (494), Expect = 2e-53
Identities = 189/623 (30%), Positives = 261/623 (41%), Gaps = 65/623 (10%)
Query: 8 AFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPE 67
A A +R G AE R LD PAH ALHL GVL ++G EA +L+ RA P
Sbjct: 828 AVAHYRTGDFALAESVVRQLLDRVPAHSVALHLGGVLAKRRGSLEEAQDLLVRASAADPH 887
Query: 68 DAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
+A+ L + LGQI+ A R + + P N G+ A A
Sbjct: 888 NASAHAALCEVRQGLGQIEAADRASRACVAVQPDSAGHWVNRTALLRRTGQVAAARSAII 947
Query: 128 KSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRA 187
++L L+PD A + + G +A+ R + L PG A L+N+G +L+ L R
Sbjct: 948 RALHLRPDLAPALGHLAELADTPG---DAVRVHRIAVSLTPGTADVLSNLGGALHKLLRF 1004
Query: 188 EEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGN 247
+EA A +P A N GN
Sbjct: 1005 DEAARLLDRATRCDPGLAVAWTN----------------------------------RGN 1030
Query: 248 ALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLA 307
AL A+G AEA A+ L P A A +L + G A+ A D AL P A
Sbjct: 1031 ALEAMGLIAEAESCHRTAIELAPSLADAHGNLAYLLKRHGRQEEALAAFDAALEADPKHA 1090
Query: 308 SAHMNRALAWLAQRDFARGLPEYEWRLQT---MAQPVIQTLPRWHGEPIAERTLLVHAEQ 364
A NR+L L G +++WR T Q T+ W GE IA R LLV EQ
Sbjct: 1091 QARYNRSLLLLETGALRAGWADHDWRFATPQFQDQRRRLTMRAWRGENIAGRRLLVWREQ 1150
Query: 365 GFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCP 424
G GD + F +RA R+V+E +L+PL A + V + A ADL
Sbjct: 1151 GVGDEILFASCYEEAMRRAGRLVIECDRRLVPLFARSFPGADVR--PESADPRDADLQIA 1208
Query: 425 LLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAK-----RKIGIAWSGRIQQN 479
SLP L P R+ +L A +WR L G ++GI W ++
Sbjct: 1209 AGSLPRLLRADLKRFPARSSWLVPDPALVARWRERLAGLGPGLGLGLRVGIGWRSQLMTA 1268
Query: 480 ETRS--MQLAALDPLFALEGIDWIVLQ-----PEL-SAEERMALDTHPRAASIHRFDKRI 531
+ ++ + L PLFA+ G+ ++ LQ EL +AEER + H R A ++ D
Sbjct: 1269 DRKAAYVMLDQWGPLFAVPGLTFVNLQYGECEAELRAAEERFGVTIH-RWADLNLKD--- 1324
Query: 532 GDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGS-PWYPGA 590
DF AA+ LD V+S S +AGAL P+W DW A TG+ PW+P
Sbjct: 1325 -DFDGAAALTANLDLVISPAMSAGELAGALGLPVWRF--GGRDWTQLA--TGARPWFPTM 1379
Query: 591 TLVRQPQPGAWGDVVEAVANALR 613
L + Q + +ANALR
Sbjct: 1380 RLFQPSQGEGLEAAIARMANALR 1402
Score = 183 bits (465), Expect = 6e-50
Identities = 196/633 (30%), Positives = 254/633 (40%), Gaps = 104/633 (16%)
Query: 4 VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
+ + A AAHR G D+A Y L P ALHL G+L HQ G A
Sbjct: 1443 LLELAVAAHRSGAHDEATPLYERVLASRPRDPVALHLSGLLAHQSGASARGE-------- 1494
Query: 64 LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
G+I A+ + AP + AH +LGN A G AA
Sbjct: 1495 -------------------GRIAAAVAE-------APEYATAHISLGNVRLALGMAGPAA 1528
Query: 124 DAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNA 183
+F +L +QPD A++ N GNAL AL R A R+ + P A A +N+G++L
Sbjct: 1529 ASFRTALAVQPDSAAALTNLGNALDALERSAAAAGLHRKAVAADPDLAEAHDNLGVALAR 1588
Query: 184 LGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIF 243
LGR EA AL P A NL+ GR A + + ALAL P L A+
Sbjct: 1589 LGRWAEAERAHAQALRRAPGLEAGWMNLSVALRRLGRLDAAERAGRRALALAPALADAMA 1648
Query: 244 GMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLR 303
G L LG A A P+ RA+ ++P A A + G G
Sbjct: 1649 NRGRLLRELGDPAAAAPWCARALAVEPGHAAAAFNGGLLELTAG---------------- 1692
Query: 304 PDLASAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVI---QTLPRWHGEPIAERTLLV 360
LAW G Y+ R T P W G P++ + LLV
Sbjct: 1693 ----------RLAW--------GWDGYDRRFDTRDMAAAFRRPGAPLWGGGPLSGKRLLV 1734
Query: 361 HAEQGFGDTLQFVRFVPLVAQRAAR----VVLEVQPQLLPLLA---PAAQAWRVTLIAQG 413
EQG GD L F + +P + A R VV+E P+ +PLLA P A R + G
Sbjct: 1735 WREQGIGDELMFAQRLPELIAWADRDGGHVVVECDPRFVPLLARSFPRATV-RPAPASPG 1793
Query: 414 APRPAADLHCPLLSLPLALGTT---FDTIPQRT-PYLSVPAAYGRKWRGSLGGQAK-RKI 468
P D H P+ SL LG T F T+ P L A WR L G ++
Sbjct: 1794 EPSSDIDAHIPIGSLSRRLGGTLPDFATMGAAVGPALRADPAAVETWRRRLSGLGDGLRV 1853
Query: 469 GIAWSGRIQQNETRSMQLAALD---PLFALEGIDWIVLQ-PELSAEERMALDTHPRAASI 524
GIAW Q + R ++ PL L G+ + LQ + AE A RA
Sbjct: 1854 GIAWRSS-QLDPDRMPDYTRIEDWRPLLTLPGLIPVNLQYGDCGAELAAARAGFGRAP-- 1910
Query: 525 HRF---DKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGE 581
H F D R D TAA++ LD V++ TS +AGAL P+W L DW G
Sbjct: 1911 HGFADLDLR-NDLDGTAALMSALDLVIAPATSTGELAGALGVPVW-RLGRTGDWT-ALGT 1967
Query: 582 TGSPWYPGATLVRQPQPGAWGDVVEAVANALRK 614
PW+P L W E VA+ L K
Sbjct: 1968 GVRPWFPLMRLF-------WTGPGERVADLLPK 1993
Score = 144 bits (364), Expect = 3e-38
Identities = 112/375 (29%), Positives = 165/375 (44%), Gaps = 41/375 (10%)
Query: 4 VFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVN 63
+ D A HR GRL +A YR L +PAH DALHL ++ HQ G+ AEA + A+
Sbjct: 6 LLDAALPLHRAGRLAEALALYRRILTDDPAHADALHLSAIIAHQTGRTAEALANLGAALA 65
Query: 64 LRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAA 123
++P A +LGN L LG +++A+ + A+ + A+ N GR +AA
Sbjct: 66 VQPGFATAYNSLGNVLADLGMLEEALSAYVVAIRQNDRYVEAYNNRATVLQRLGRRNEAA 125
Query: 124 DAFEKSLRLQPDDASSHNNFGNALHALGR------------------------------- 152
+A+ ++L + PD+ ++ N+G LG+
Sbjct: 126 EAYARALTMGPDNLTARFNYGVLQRELGQISPAANAFYAVVQADPSHSAAWRHLAICLRN 185
Query: 153 --HTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFN 210
H +A A RR ++ PG +G LN+ G E A A+AA P HF+
Sbjct: 186 LGHPDAEACLRRALQDAPGDKDLSLELGALLNSRGDHEAACGVLAAAVAAHPGIAQLHFS 245
Query: 211 LANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDP 270
T R EAV F+ AL +P + A +G AL LG A L RAV L P
Sbjct: 246 YGTALQGTRRLREAVVQFRLALDREPAMQGACNNLGVALLELGEMGPATLVLSRAVALSP 305
Query: 271 QFALAWLSLGTAHQ-----ALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFAR 325
A+ + GT+ + + PA R +ALRLRPD A +N A + +R+
Sbjct: 306 GDAMVVNNHGTSLENRYDLEADSERPA-RWYRRALRLRPDYGKALVNLAGIHILRRELHH 364
Query: 326 GLPEYEWRLQTMAQP 340
E +R +A P
Sbjct: 365 A--ERLYRRAAVADP 377
Score = 40.4 bits (93), Expect = 8e-07
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 17 LDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLG 76
L AER YR +P V+ LG L + ++A + RRA+ + + G
Sbjct: 362 LHHAERLYRRAAVADPRSVETFVNLGGLLLDRDDLSQAGRMYRRALAIDAGSPSALTGYG 421
Query: 77 NALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAF-EKSLRLQPD 135
L+ LG+I +A R AL + A NLG + + AA+ + + +L + P
Sbjct: 422 LVLQRLGRIGEAEAAHRRALEIDGRHAEAAGNLGMMLWQCHQDDTAAEPWMDLALSVNPS 481
Query: 136 DASSHNNFG 144
++H N G
Sbjct: 482 LNTAHLNRG 490
Score = 30.4 bits (67), Expect = 8e-04
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 13 RDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAE-LVRRAVNLRPEDAAL 71
R GR+ +AE +R L+ + H +A LG++ Q Q AAE + A+++ P
Sbjct: 426 RLGRIGEAEAAHRRALEIDGRHAEAAGNLGMMLWQCHQDDTAAEPWMDLALSVNPSLNTA 485
Query: 72 QLNLGNALKALGQIDDAIEQFR 93
LN G + G + + +R
Sbjct: 486 HLNRGMLRLSRGDLPGGWDGYR 507