Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 589 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  299 bits (766), Expect = 2e-85
 Identities = 210/611 (34%), Positives = 283/611 (46%), Gaps = 45/611 (7%)

Query: 8   AFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPE 67
           A A H  GR ++AE  YRA L   P H  ALHLLGVL    G+   AA+L+  ++   P 
Sbjct: 13  AIAHHAAGRAEEAELAYRAVLAARPGHPGALHLLGVLALHHGRPVVAAQLIGESIRQDPG 72

Query: 68  DAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
           + A   +L  AL+ LGQ   A      AL L P  P     L +  +  G H  AAD   
Sbjct: 73  NPASFSSLAGALRQLGQPGKARVGACLALALDPCLPDGLGTLADILSDVGEHGAAADVLG 132

Query: 128 KSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRA 187
           + L L P          +AL   GR+ EA+      + + P       N+G++L  LGR 
Sbjct: 133 RVLVLSPWSTEPRLKHAHALLHAGRNEEAVGTLMTLLGMTPLSVAGYTNLGVALRRLGRV 192

Query: 188 EEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGN 247
           EEA+  +++AL           NL  T+   GR+ EA A F+ ++A+QP+   A   +G 
Sbjct: 193 EEAMAAYRSALGFSSGEPGTLNNLGITYQDLGRYEEAAACFRRSIAVQPDGAHAHLNLGL 252

Query: 248 ALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLA 307
                 R  E++    RA  L+P       +L  AH AL +HG  ++             
Sbjct: 253 VARDEMRVDESIVLARRAAILEP-------ALAEAHTAL-SHGLLIKG------------ 292

Query: 308 SAHMNRALAWLAQRDFARGLPEYEWRLQTMAQPVIQ---TLPRWHGEPIAERTLLVHAEQ 364
                         +F  G  EYEWR +    P  +     P W G P+A RTLLVH EQ
Sbjct: 293 --------------EFREGFAEYEWRSRMTDFPSPRRDFASPVWDGSPLAGRTLLVHDEQ 338

Query: 365 GFGDTLQFVRFVPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCP 424
           G GDT+ F R+  L+    ARV+L+   QL+ LL  ++      ++ +  P P  D+H  
Sbjct: 339 GVGDTIMFARYAALLQTHGARVLLDCNGQLVRLL--SSMPGIAGVVPRHGPPPPHDVHVA 396

Query: 425 LLSLPLALGTTFDTIPQRTPYLSVPAAYGRKWRGSLGGQAKRKIGIAWSG--RIQQNETR 482
           L SLP  L  T  TIP    YL         WR  LG +   ++G+ W+G    + +  R
Sbjct: 397 LASLPHMLRATLYTIPAPFAYLRAEPDLVESWRARLGSKTGLRVGLVWAGNPEFKGDGLR 456

Query: 483 SMQLAALDPLFALEGIDWIVLQPELSAEERMALD-THPRAASIHRFDKRIGDFADTAAII 541
           S  LAA  PL  L G+    LQ       R  LD   P  A        I DFADTAAI+
Sbjct: 457 SPGLAAFRPLLDLPGVSVFGLQ---KGAGRHDLDRCGPLPAGFVDLGADIADFADTAAIM 513

Query: 542 ERLDAVVSIDTSIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAW 601
           E LD +VS  T  AH+AGAL +P+W +LPFA DWRW      +PWYP   L RQ + G W
Sbjct: 514 ENLDLIVSSCTGPAHLAGALGRPVWTVLPFAPDWRWLEHGVCTPWYPTMRLFRQERRGDW 573

Query: 602 GDVVEAVANAL 612
             VV  +   L
Sbjct: 574 SAVVSRLCAVL 584



 Score = 49.7 bits (117), Expect = 4e-10
 Identities = 40/159 (25%), Positives = 63/159 (39%)

Query: 2   QPVFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRA 61
           +P    A A    GR ++A       L   P  V     LGV   + G+  EA    R A
Sbjct: 143 EPRLKHAHALLHAGRNEEAVGTLMTLLGMTPLSVAGYTNLGVALRRLGRVEEAMAAYRSA 202

Query: 62  VNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHED 121
           +     +     NLG   + LG+ ++A   FR ++ + P    AH NLG       R ++
Sbjct: 203 LGFSSGEPGTLNNLGITYQDLGRYEEAAACFRRSIAVQPDGAHAHLNLGLVARDEMRVDE 262

Query: 122 AADAFEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAF 160
           +     ++  L+P  A +H    + L   G   E  A +
Sbjct: 263 SIVLARRAAILEPALAEAHTALSHGLLIKGEFREGFAEY 301



 Score = 43.5 bits (101), Expect = 3e-08
 Identities = 41/150 (27%), Positives = 57/150 (38%)

Query: 169 GHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASF 228
           G    L    ++ +A GRAEEA   ++  LAA P    A   L       GR   A    
Sbjct: 4   GRLDGLLQAAIAHHAAGRAEEAELAYRAVLAARPGHPGALHLLGVLALHHGRPVVAAQLI 63

Query: 229 KAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGA 288
             ++   P  P +   +  AL  LG+  +A      A+ LDP       +L      +G 
Sbjct: 64  GESIRQDPGNPASFSSLAGALRQLGQPGKARVGACLALALDPCLPDGLGTLADILSDVGE 123

Query: 289 HGPAVRALDQALRLRPDLASAHMNRALAWL 318
           HG A   L + L L P      +  A A L
Sbjct: 124 HGAAADVLGRVLVLSPWSTEPRLKHAHALL 153