Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 1293 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  249 bits (637), Expect = 4e-70
 Identities = 176/542 (32%), Positives = 258/542 (47%), Gaps = 15/542 (2%)

Query: 84   QIDDAIEQFRNALTLAPSFPMAHYNL---GNAYAAAGRHEDAADAFEKSLRLQPDDASSH 140
            +I + + +FR+   +AP    A   L   G A    G    A   + ++  L P +  + 
Sbjct: 749  RIRETLARFRHLGWIAPQAEPAPETLIENGRAREREGDGTAAEALWRRAAALDPTNIEAF 808

Query: 141  NNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAA 200
            +     L A     EA+   R    L P  +  L  +  SL  L R E  +      +  
Sbjct: 809  HALAERLLARNATAEALQPLRCCTRLDPEGSFHLFKLARSLLLLRRYEAGVAVLIDLVRR 868

Query: 201  EPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAA-LGRHAEAL 259
            EP    A+ NLA      G H  AVA  + ALAL P     +  +G AL+  +G    A 
Sbjct: 869  EPEEHRAYGNLAVALKNLGLHERAVAVGRRALALMPADAGLLNNLGLALSMRVGGDEAAF 928

Query: 260  PYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLA 319
              L RA+ L+P  A   ++     ++L     A  A  + +  RP+   AH   A   L 
Sbjct: 929  DALSRAMVLEPDHAETLMNRALVLRSLHRLDDAETACRRLVAQRPEDPGAHTLLATCLLM 988

Query: 320  QRDFARGLPEYEWRLQTMAQPVIQT----LPRWHGEPIAERTLLVHAEQGFGDTLQFVRF 375
            + D A G   YEWR Q +A   ++      P W G  +  R +L+H EQG GD +QF R+
Sbjct: 989  RGDLAPGFRAYEWRTQ-LADGQVEARGLPTPPWSGGALDGRRILLHDEQGLGDAIQFARY 1047

Query: 376  VPLVAQRAARVVLEVQPQLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTT 435
             PL+A+R A V+++ +  L+ LLA        T++   AP P  D H  L+SLP  LGTT
Sbjct: 1048 APLLARRGAHVIVQCRDALVRLLATLPGV--ATVVGHSAPTPQHDGHAALMSLPHLLGTT 1105

Query: 436  FDTIPQRTPYLSVPAAYGRKWRGSLGG-QAKRKIGIAWSGR--IQQNETRSMQLAALDPL 492
              T+P   PYL+   A    WR  LG  +A   +G+ W+G   +  +  RS  L  L PL
Sbjct: 1106 LATVPAEVPYLAAEPALVGMWRDRLGPVRAGLHVGLVWAGNADLPDDAKRSPGLKPLLPL 1165

Query: 493  FALEGIDWIVLQPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDT 552
              L GI ++ LQ      +   L      A  H     + D ADTAA++ +LD V+S+D+
Sbjct: 1166 LDLPGIAFVSLQKGGGRADLEQLGGR-LPAGFHDVGDGLDDLADTAAVVAQLDLVISVDS 1224

Query: 553  SIAHVAGALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANAL 612
            ++AH+AGAL +P+W ++   ++WRW    T SPWYP   L RQ + G W DVV A+  AL
Sbjct: 1225 AVAHLAGALGRPVWTIVRAESEWRWMLERTDSPWYPTMRLFRQARAGDWSDVVAALCTAL 1284

Query: 613  RK 614
            ++
Sbjct: 1285 QR 1286



 Score = 72.0 bits (175), Expect = 1e-16
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 1/212 (0%)

Query: 2   QPVFDRAFAAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRA 61
           + + +   A  R+G    AE  +R     +P +++A H L      +   AEA + +R  
Sbjct: 772 ETLIENGRAREREGDGTAAEALWRRAAALDPTNIEAFHALAERLLARNATAEALQPLRCC 831

Query: 62  VNLRPEDAALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHED 121
             L PE +     L  +L  L + +  +    + +   P    A+ NL  A    G HE 
Sbjct: 832 TRLDPEGSFHLFKLARSLLLLRRYEAGVAVLIDLVRREPEEHRAYGNLAVALKNLGLHER 891

Query: 122 AADAFEKSLRLQPDDASSHNNFGNALH-ALGRHTEAIAAFRRTIELRPGHAGALNNMGMS 180
           A     ++L L P DA   NN G AL   +G    A  A  R + L P HA  L N  + 
Sbjct: 892 AVAVGRRALALMPADAGLLNNLGLALSMRVGGDEAAFDALSRAMVLEPDHAETLMNRALV 951

Query: 181 LNALGRAEEAIPCFQTALAAEPRFVAAHFNLA 212
           L +L R ++A    +  +A  P    AH  LA
Sbjct: 952 LRSLHRLDDAETACRRLVAQRPEDPGAHTLLA 983



 Score = 35.4 bits (80), Expect = 2e-05
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 32   PAHVDALHLLGV-LRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIE 90
            PA    L+ LG+ L  + G    A + + RA+ L P+ A   +N    L++L ++DDA  
Sbjct: 904  PADAGLLNNLGLALSMRVGGDEAAFDALSRAMVLEPDHAETLMNRALVLRSLHRLDDAET 963

Query: 91   QFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFE 127
              R  +   P  P AH  L       G       A+E
Sbjct: 964  ACRRLVAQRPEDPGAHTLLATCLLMRGDLAPGFRAYE 1000