Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  285 bits (730), Expect = 3e-81
 Identities = 209/596 (35%), Positives = 288/596 (48%), Gaps = 31/596 (5%)

Query: 37  ALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALGQIDDAIEQFRNAL 96
           AL   G     +G+   AA L   A  L P  A++  NL  A +ALGQ   A + + +AL
Sbjct: 14  ALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHHAL 73

Query: 97  TLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGRHTEA 156
            L P++P A   L +    + R + AA A  ++L L P  A + +  G+ L         
Sbjct: 74  RLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILLDRRAMERL 133

Query: 157 IAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIP--CFQTALAAEPRFVAAHFNLANT 214
               RR + L   +   L  + ++      AE A+P  C + A+A  P   A + N A  
Sbjct: 134 PIVLRRAVRLAQDNP--LPWLALAGGLGETAEPALPLACVRRAVALSPDRPAGYVNHAGL 191

Query: 215 FDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFAL 274
               GR   A A       L P    A  G        G  A AL    R++ L P    
Sbjct: 192 LIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVATLRGDFATALSLARRSLSLQPASPA 251

Query: 275 AWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYE--W 332
           A ++L  A    G   PA    ++AL L+P+   A  N ++  LA+ DFA+G   YE  W
Sbjct: 252 ALINLSLAEHGSGMTEPARLGNERALALQPESDVARFNLSMVLLAEGDFAKGWRLYESRW 311

Query: 333 RLQTMAQPVIQTLPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVVLEVQP 392
           R++ +A P     PRW G   A R+LL+ AEQG GDTLQFVR+ P++A   A V L VQP
Sbjct: 312 RMERVAYPA--HAPRWTGGNPAGRSLLLVAEQGQGDTLQFVRYAPMLAALGAHVHLMVQP 369

Query: 393 QLLPLLAPAAQAWRVTLIAQGAPRPAADLHCPLLSLPLALGTTFDTIPQRTPYLSVP--- 449
            L+ LL+       V  + +  P PA D   PLLSLPL  GT   TIP   PYLS P   
Sbjct: 370 ALVRLLSGLPGIASVRSLTE--PPPACDACIPLLSLPLVFGTGLATIPASVPYLSPPGQE 427

Query: 450 -AAYGRKWRGSLGGQAKRKIGIAWSGRIQQNE--------TRSMQLAALDPLFALEGIDW 500
            AA+ R+  GS GG+   K+G+ W+G     +         RS+ LAAL PL  + G+ +
Sbjct: 428 RAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQFVAHMVDRRRSLPLAALAPLAGIPGVRF 487

Query: 501 IVLQPELSAEERMALDTHPRAASIHRFD--KRIGDFADTAAIIERLDAVVSIDTSIAHVA 558
             LQ    A E        R + +   D    + DFADTAA++  LD V+S+DTS+ H+A
Sbjct: 488 YSLQKGPPASEA-------RTSGLDLVDWMDEVEDFADTAALVAELDLVISVDTSVCHLA 540

Query: 559 GALRKPLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVEAVANALRK 614
           GAL +P+W++    A WRW    + SPWYP   L RQ +PG W  V+  V  AL +
Sbjct: 541 GALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQDRPGDWPPVILRVRTALER 596



 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 53/159 (33%), Positives = 65/159 (40%), Gaps = 10/159 (6%)

Query: 171 AGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKA 230
           A AL   G +  A G A  A   F TA    P   +   NLA    A G+ A A  ++  
Sbjct: 12  AAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHH 71

Query: 231 ALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAHG 290
           AL L+P  P A  G+ + L    R   A     RA+ LDP FA AW   G+      A  
Sbjct: 72  ALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILLDRRAME 131

Query: 291 PAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPE 329
                L +A+RL  D         L WLA    A GL E
Sbjct: 132 RLPIVLRRAVRLAQD-------NPLPWLA---LAGGLGE 160



 Score = 26.9 bits (58), Expect = 0.003
 Identities = 20/59 (33%), Positives = 25/59 (42%)

Query: 25  RATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNALKALG 83
           R +L   PA   AL  L +  H  G    A     RA+ L+PE    + NL   L A G
Sbjct: 240 RRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVARFNLSMVLLAEG 298