Pairwise Alignments

Query, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

Subject, 543 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  218 bits (556), Expect = 4e-61
 Identities = 173/523 (33%), Positives = 234/523 (44%), Gaps = 21/523 (4%)

Query: 93  RNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASSHNNFGNALHALGR 152
           R AL L P+       LG A   +G    A   F +SL   PD+ +   N    L  LGR
Sbjct: 14  RQALALDPAHGDGWSILGVAAIGSGDAVGALAPFRRSLCSAPDNPAYARNLAACLKRLGR 73

Query: 153 HTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALAAEPRFVAAHFNLA 212
             EA A   R           L ++     A G A  A+P ++ AL   P    +  NLA
Sbjct: 74  AEEAAAVLHRAALAGALAPDLLCDLADLRLASGDASAALPLYRAALLLAPDHGRSLNNLA 133

Query: 213 NTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQF 272
            T         A A+  A LA      PA    G  L   GR  EA P L RA+ LDP  
Sbjct: 134 ETLRRQAM--PAAATELARLARLRGTAPAWAAAGAELVEAGRIEEAQPALCRALVLDPAD 191

Query: 273 ALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLPEYEW 332
             +W +LG AH        AV     A RL P LA A + +  A +       G   YE 
Sbjct: 192 PASWSNLGFAHLQRHRAEAAVAPFAHARRLDPALAEAAVGQGSALMLMGRLREGAALYEE 251

Query: 333 RLQTMAQPVIQT-----LPRWHGEPIAERTLLVHAEQGFGDTLQFVRFVPLVAQRAARVV 387
           R++    P+ Q       P W G      TLL+HA++G GD +QF+R+ P++  +  RV+
Sbjct: 252 RVRL---PLFQPPRRFGRPDWDGSIRPGATLLIHADRGIGDAIQFIRYAPILRAQGMRVL 308

Query: 388 LEVQPQLLPLLAPAAQAWRVTLIAQGAPR--PAADLHCPLLSLPLALGTTFDTIPQRTPY 445
              Q  LL LL  +    R+   A G     P  D+H  ++SL   +GT  D+IP   PY
Sbjct: 309 FCGQENLLGLLRSS----RMVDAAFGYDEELPPYDMHAHVMSLVHRMGTELDSIPADIPY 364

Query: 446 LSVPAAYGRKWRGSLGGQAKRKIGIAWSGRI--QQNETRSMQLAALDPLFALEGIDWIVL 503
           L    A    W G   G    +IGI W+G +  + +  RS +L  L PLF + G   +VL
Sbjct: 365 LHASQAAKALWAGRAAGLEGLRIGIVWAGSVHFRYDRVRSPRLEPLLPLFGIPGTTAVVL 424

Query: 504 QPELSAEERMALDTHPRAASIHRFDKRIGDFADTAAIIERLDAVVSIDTSIAHVAGALRK 563
           Q     + R  +   P  A    +   +    +TAA +  LD V+S  T +AH+AGAL +
Sbjct: 425 Q---FGQGRDDMAKVPLPAGTVDWGCSLQGMDNTAAALGELDVVISSCTFMAHLAGALGR 481

Query: 564 PLWLMLPFAADWRWFAGETGSPWYPGATLVRQPQPGAWGDVVE 606
           P+ ++L   ++WRW  G   SPWYP A L RQ  PG W   VE
Sbjct: 482 PVSVLLHAGSEWRWLRGREESPWYPTARLYRQTAPGDWSGPVE 524



 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 79/249 (31%), Positives = 97/249 (38%), Gaps = 2/249 (0%)

Query: 20  AERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAALQLNLGNAL 79
           A R  R  L  +PAH D   +LGV     G    A    RR++   P++ A   NL   L
Sbjct: 9   ARRALRQALALDPAHGDGWSILGVAAIGSGDAVGALAPFRRSLCSAPDNPAYARNLAACL 68

Query: 80  KALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSLRLQPDDASS 139
           K LG+ ++A      A       P    +L +   A+G    A   +  +L L PD   S
Sbjct: 69  KRLGRAEEAAAVLHRAALAGALAPDLLCDLADLRLASGDASAALPLYRAALLLAPDHGRS 128

Query: 140 HNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNALGRAEEAIPCFQTALA 199
            NN    L        A     R   LR G A A    G  L   GR EEA P    AL 
Sbjct: 129 LNNLAETLRRQAM-PAAATELARLARLR-GTAPAWAAAGAELVEAGRIEEAQPALCRALV 186

Query: 200 AEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEAL 259
            +P   A+  NL        R   AVA F  A  L P L  A  G G+AL  +GR  E  
Sbjct: 187 LDPADPASWSNLGFAHLQRHRAEAAVAPFAHARRLDPALAEAAVGQGSALMLMGRLREGA 246

Query: 260 PYLERAVGL 268
              E  V L
Sbjct: 247 ALYEERVRL 255



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 256 AEALPYLERAVGLDPQFALAWLSLGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRAL 315
           A A   L +A+ LDP     W  LG A  A+G+ G AV AL      R  L SA  N A 
Sbjct: 7   AAARRALRQALALDPAHGDGWSILGVA--AIGS-GDAVGAL---APFRRSLCSAPDNPAY 60

Query: 316 A 316
           A
Sbjct: 61  A 61