Pairwise Alignments

Query, 783 a.a., DNA-dependent helicase from Burkholderia phytofirmans PsJN

Subject, 806 a.a., ATP-dependent DNA helicase UvrD/PcrA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  957 bits (2474), Expect = 0.0
 Identities = 510/801 (63%), Positives = 600/801 (74%), Gaps = 30/801 (3%)

Query: 4   LLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTFTNK 63
           LLA LN EQ AAV LP E ALILAGAGSGKTRVL TRIAWL+Q G  SP  ILAVTFTNK
Sbjct: 14  LLAGLNAEQSAAVLLPAEHALILAGAGSGKTRVLTTRIAWLLQSGQVSPGGILAVTFTNK 73

Query: 64  AAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSAIKR 123
           AA+EMM+RLSA+LPI+ RGMWIGTFHGLCNR LRAHH+ A LPATFQILDT DQLSAIKR
Sbjct: 74  AAKEMMTRLSAMLPINVRGMWIGTFHGLCNRFLRAHHKLANLPATFQILDTQDQLSAIKR 133

Query: 124 LMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQREGV 183
           L K  N+DDE+YP K +QYFI+  KE G RP DV A D   RK +ELY  Y++QCQREGV
Sbjct: 134 LCKQFNVDDERYPPKQIQYFISGCKEDGQRPHDVPARDEETRKKLELYALYEEQCQREGV 193

Query: 184 VDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKM-----LAGQT- 237
           VDF EL+LR YE+L  N P+R HYQ RFRHIL+DEFQDTN+LQYAW+KM     L G T 
Sbjct: 194 VDFGELMLRSYEVLRDNDPVREHYQRRFRHILIDEFQDTNRLQYAWIKMFSAPPLEGLTP 253

Query: 238 --NSIFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIA 295
             N++FAVGDDDQSIYAFRGA VGNM DF  EF VRH IKLEQNYRS  +ILD+ANQLI+
Sbjct: 254 SGNAVFAVGDDDQSIYAFRGARVGNMADFVREFGVRHQIKLEQNYRSVSNILDSANQLIS 313

Query: 296 NNSRRLGKNLRTDAGHGEPVRVYESATDSQEASWIVEEIKALISTGTSRSEIAILYRSNA 355
           +N+ RLGKNLRTDAG GEPVRV+E+ +D  EA W+V+E+K L   G  RSE+A+LYRSNA
Sbjct: 314 HNTHRLGKNLRTDAGAGEPVRVFEATSDFAEAQWMVDEMKQLAREGIPRSEMAVLYRSNA 373

Query: 356 QSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGI 415
           QSR +E  L NA + YRVYGGLRFFER E+KHALAYLRL++N +DDT+F RVVNFP RGI
Sbjct: 374 QSRVVETALFNAALPYRVYGGLRFFERAEIKHALAYLRLLENAHDDTSFLRVVNFPPRGI 433

Query: 416 GARSIEQLADAARLYNCSMAAAIPYVAGKAGSSLAAFANLVGKMRAETQQMSLPETVEYV 475
           GARSIEQL D AR   CS+  A+  V G+AG ++  FA  +  MR +T+  +L E +E V
Sbjct: 434 GARSIEQLQDVARTSGCSLHDAVSAVTGRAGVAVGNFAAKIDVMREQTEGRTLREIIELV 493

Query: 476 VRTSGLSEFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPEL 535
           +  SGL E Y+ EREGQDR+ENL+ELVNAA +FVS EG+G D  A ++P+        + 
Sbjct: 494 LAHSGLIEHYRGEREGQDRVENLEELVNAAESFVSIEGFGRD--AVALPVDELGKPLTQS 551

Query: 536 AVATD-DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVH 594
            V+   DPN  V+D P +A  A+  +T++PLA FL+HA+LE+GDNQAQAGQ+AVQLMTVH
Sbjct: 552 PVSQGLDPNLPVVDEP-LAPDAETGETLSPLAAFLTHAALESGDNQAQAGQDAVQLMTVH 610

Query: 595 AAKGLEFTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRML 654
           AAKGLEF  VFITG+EEGLFPHENS  + DGLEEERRLMYVAITRA++RLYLS +Q+RML
Sbjct: 611 AAKGLEFDCVFITGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLYLSHSQTRML 670

Query: 655 HGQTRYNIRSRFFDELPQETLKWLTPKVEA-GARWGGRSDNAGYGRDWFARPGYTG-PAS 712
           HGQTRYN++SRFFDELP+E LKWLTP   A  A  GG     G G+    R G+ G PA+
Sbjct: 671 HGQTRYNMKSRFFDELPEECLKWLTPPQPAWSAPMGG-----GGGQWQNGRRGFGGAPAA 725

Query: 713 STPAQLPAFANE-------QRAAE----TGFRVGQQVFHTKFGEGTITALEGGGADAKAQ 761
             P+  P F          Q A E    T  R G  VFH KFGEG + A+EG G DA+AQ
Sbjct: 726 LQPSWSPGFKERGDPKGLGQTAPEPDRGTEIRAGLAVFHNKFGEGKVLAVEGAGDDARAQ 785

Query: 762 VKFKRHGEKWLALAVAKLQAV 782
           V F RHG KWLAL+VAKL  +
Sbjct: 786 VNFTRHGTKWLALSVAKLTPI 806