Pairwise Alignments

Query, 505 a.a., chemotaxis protein CheY from Burkholderia phytofirmans PsJN

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  333 bits (853), Expect = 1e-95
 Identities = 198/507 (39%), Positives = 291/507 (57%), Gaps = 60/507 (11%)

Query: 4   IWIVDDDQSIRWVLEKALARENFATRSFANVREASAALDHDSPQVLVSDIRMPGGSGLEL 63
           I IVDD+ ++R +L  A A + F T    N R A        P V++ DIRMP   G++ 
Sbjct: 7   ILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKA 66

Query: 64  LQTVRDKVPGLPVIIMTAFSDLDSAVAAFQGGAFEYLAKPFDVDKAVELIRRAVG-ESMR 122
           L+ +R      PVI+MTA++++++AV A + GAF+Y+ KPFD+D+   +++RA+  +SM+
Sbjct: 67  LKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMK 126

Query: 123 GEQTWDERVTEAP----EMLGQAPAMQDMFRAIGRLSHSAATVLITGESGTGKELVARAL 178
            E     +          +L  +PAM D+ +   +++ S A+VLI+GESGTGKEL+ARA+
Sbjct: 127 KEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAI 186

Query: 179 HRHSPRANGPFIALNTAAIPKDLLESELFGHERGAFTGAQAMRQGRFEQAENGTLFLDEI 238
           H +S RA GPFI +N AA+P+ LLESELFGHE+GAFTGAQ +RQG FE+A  GTL LDEI
Sbjct: 187 HYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEI 246

Query: 239 GDMPFDLQTRLLRVLSDGQFYRVGGHNPLRANVRVIAATHQNLESRVRQGLFREDLYHRL 298
           G+MP  LQ +LLR+L + +F R+GGH  ++ ++R+IAAT+++L++ V++G FREDL++RL
Sbjct: 247 GEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRL 306

Query: 299 NVIRLRLPALRERSEDIPLLTRHFLQKSARDLGVEPKRVSEEALAHLASLPFPGNVRQLE 358
           NVI L LP LR+R EDI LL  HFLQK + +   +   +   A++ L +  +PGN+R+L 
Sbjct: 307 NVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELS 366

Query: 359 NLANWLTVMAPAQTIEIKDLPPDLGPAQAGVSDLTGGGGGVIGAGDATLAGGVPVNGTSA 418
           N+     VM     I  +DLPP +                V  AG+   A   PV     
Sbjct: 367 NVIERAVVMNSGPIIFSEDLPPQIRQP-------------VCNAGEVKTA---PVG---- 406

Query: 419 ATHPAAAGGMPAATTVSAWEGGLRTEVARMLRENAADVMDELARRFEAAVIREALDFTRG 478
                              E  L+ E+                +R E  +I E L+   G
Sbjct: 407 -------------------ERNLKEEI----------------KRVEKRIIMEVLEQQEG 431

Query: 479 RKVEAAERLGIGRNTITRKIQELNLEP 505
            +   A  LGI R  +  K+QE  ++P
Sbjct: 432 NRTRTALMLGISRRALMYKLQEYGIDP 458