Pairwise Alignments

Query, 383 a.a., dual-specificity RNA methyltransferase RlmN from Burkholderia phytofirmans PsJN

Subject, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  314 bits (804), Expect = 3e-90
 Identities = 178/355 (50%), Positives = 223/355 (62%), Gaps = 9/355 (2%)

Query: 30  RAKQLQRWIHQYNAADFDGMTDLAKSLREKLKGRATISMPGIVSDNISTDGTRKWLI--- 86
           R  QL  W++    +DFD MT++AK LREKLK   TI+ P IV + IS DGTRKWL+   
Sbjct: 32  RVSQLWNWLYVRGVSDFDNMTNVAKELREKLKAAFTIARPEIVEEQISNDGTRKWLMRFP 91

Query: 87  --DVGNSNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLTTAEIIGQLRM 144
               G    +ETVYIPEE RGTLC+SSQ GC++ C FC TG Q   RNLT  EI+ QL +
Sbjct: 92  PRGAGRPVEIETVYIPEEGRGTLCISSQVGCSLTCSFCHTGTQRLVRNLTAEEILSQLLL 151

Query: 145 AEFALRASRGIDGGRATGGDGKGE-RVVTNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYG 203
           A    R     DG    G     E R V+N+VMMGMGEPL N++ V  A+ +  D +   
Sbjct: 152 ARD--RLGDFPDGSTPVGAYVPSEGRKVSNIVMMGMGEPLYNFEHVKTALLIATDGDGLS 209

Query: 204 LSRRRVTLSTSGVVPMMDRLGADLPVALAVSLHAPSDPLRDMLVPLNKKYPLRELMAACQ 263
           LS+RRVTLSTSGVVP + R G ++ V LA+SLHA  D LRDMLVP+NKKYPL+EL+ AC+
Sbjct: 210 LSKRRVTLSTSGVVPEIFRTGDEIGVMLAISLHAVRDDLRDMLVPINKKYPLKELIEACR 269

Query: 264 RYLKVAPRDFITFEYCMLDGVNDSEAQARELLALTRDVPCKFNLIPFNPFPESGLIRSKP 323
            Y  V+    ITFEY ML  VNDS   A+ L+ L + VP K NLIPFNP+P +    S+ 
Sbjct: 270 NYPGVSNARRITFEYVMLKDVNDSLEDAKMLVQLLKGVPAKINLIPFNPWPGTNYQCSEW 329

Query: 324 EQIKRFAQVLMDAGVVTTVRKTRGDDIDAACGQLAGAVKDRTRLAERTGKAAKVI 378
            QI++FA  +  AG  + +R  RG DI AACGQL  +  +R R  ER    A +I
Sbjct: 330 AQIEKFADFINQAGYASPIRTPRGRDILAACGQLK-SESERMRKTERLAFEAMMI 383