Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Burkholderia phytofirmans PsJN

Subject, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

 Score =  513 bits (1321), Expect = e-150
 Identities = 263/459 (57%), Positives = 341/459 (74%), Gaps = 13/459 (2%)

Query: 1   MAK-PKTLYICSECGGQSPKWAGQCPSCNAWNTLVE-SVAEAPSTHRFQAL------AKS 52
           MAK PK  ++C+ECG   P+W GQC +C+AWNT+ E  +A +P   R + L      A  
Sbjct: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60

Query: 53  APVRRLADIEASDVPRFSTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIA 112
           A V++L+DI   ++PRFSTG  EFDRVLGGG+VPG  +LIGG+PG GKSTLLLQ+L ++A
Sbjct: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120

Query: 113 ADKRALYISGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATISEQRPDVAV 172
              + LY++GEES  Q+A+RA RL L         L +L+E  +E+I     E++P + V
Sbjct: 121 QQMKTLYVTGEESLQQVAMRAHRLGL-----PTDNLNMLSETSIEQICLIAEEEQPKLMV 175

Query: 173 IDSIQTVYSDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEH 232
           IDSIQ ++   + S+PGSVAQVRE AA LTR AK  G  I+MVGHVTK+G+LAGP+VLEH
Sbjct: 176 IDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEH 235

Query: 233 IVDTVLYFEGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSV 292
            +D  +  +GD  S +R +R+ KNRFGAVNELGVFAMTE+GLR V+NPSA+FLS+ ++  
Sbjct: 236 CIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVT 295

Query: 293 PGSCVLVTQEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFD 352
            GS V+V  EGTRPLLVE+QALVD +   NPRR+AVGLEQNRLA+LLAVLHRH G+   D
Sbjct: 296 SGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMAD 355

Query: 353 QDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQER 412
           QDVF+N VGGVK+TE +ADLA+LLA+ SS+R++PLP+ LVVFGEVGLAGEIRP P GQER
Sbjct: 356 QDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQER 415

Query: 413 LKEAAKLGFSVAVIPKANAPKQPIEGLQVVAVERIEQAI 451
           + EAAK GF  A++P AN PK+  EG+Q+  V+++  A+
Sbjct: 416 ISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454