Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Burkholderia phytofirmans PsJN

Subject, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

 Score =  416 bits (1070), Expect = e-121
 Identities = 220/439 (50%), Positives = 289/439 (65%), Gaps = 17/439 (3%)

Query: 1   MAKPKTLYICSECGGQSPKWAGQCPSCNAWNTLVES-----VAEAPSTHRFQALAKSAPV 55
           MAK KT ++C  CG    +WAG+C  C  WNT+VE      +   P     +   K  PV
Sbjct: 1   MAKAKTQFVCQNCGTVHNRWAGKCEGCGEWNTIVEEDPMGGIGSGPG----KVPKKGRPV 56

Query: 56  RRLA-DIEASDVPRFSTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIAA- 113
              +   E  + PR  TG+SE DR  GGG V G  VLIGGDPGIGKSTLL+Q+ A ++  
Sbjct: 57  TLTSLSGEIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRR 116

Query: 114 DKRALYISGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATISE-QRPDVAV 172
             R +Y+SGEE+ AQ+ LRAQRL     GS  +++ L AE  +E I AT+SE +RPD+ +
Sbjct: 117 GHRVIYVSGEEAVAQVRLRAQRL-----GSADTDVLLAAETNVEDILATVSEGKRPDLII 171

Query: 173 IDSIQTVYSDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEH 232
           IDSIQT++SD   SAPG+V QVR     + R AKQ+G T+++VGHVTKEG +AGPRV+EH
Sbjct: 172 IDSIQTLWSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRVVEH 231

Query: 233 IVDTVLYFEGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSV 292
           +VD VLYFEGD    YR++R +KNRFG  +E+GVF M++ GLR V+NPS LFL +  +  
Sbjct: 232 MVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERNEKS 291

Query: 293 PGSCVLVTQEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFD 352
           PG+ V    EGTRP+LVEVQALV + +   PRR  VG + +RLAM+LAVL  H G+    
Sbjct: 292 PGAAVFAGIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVKLGQ 351

Query: 353 QDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQER 412
            DV+LN  GG +I+EPAAD+A+  A+ SS+    LP   V FGE+ L+G +RP     +R
Sbjct: 352 HDVYLNVAGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVAHTVQR 411

Query: 413 LKEAAKLGFSVAVIPKANA 431
           LKEA KLGFS A++P  +A
Sbjct: 412 LKEAEKLGFSAALLPSGSA 430