Pairwise Alignments

Query, 688 a.a., DNA ligase from Burkholderia phytofirmans PsJN

Subject, 724 a.a., DNA ligase from Agrobacterium fabrum C58

 Score =  546 bits (1408), Expect = e-159
 Identities = 323/712 (45%), Positives = 432/712 (60%), Gaps = 52/712 (7%)

Query: 19  AWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQRVGGEAAS 78
           A+L AEL R +  Y+  D P++ DA+YD L +  ++IE   P L+  DSP+++VG     
Sbjct: 21  AFLAAELARHDALYHGKDAPEISDADYDALKRRNDAIEAAFPALVRADSPSKKVGFTPLP 80

Query: 79  GFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPVDYAAELKFDGLAISL 138
            F P+VH +PMLSL+N F++ED+  F   V   LG     P   + + AE K DGL++S+
Sbjct: 81  TFAPIVHARPMLSLDNTFSEEDLRDFVSSVYRFLGHL---PDDSIAFTAEPKIDGLSMSI 137

Query: 139 RYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVPHVLDVRGEVLMFKRDFER 198
           RY +     A+TRGDGTTGENVT N+RTI+ IP +L     P V++VRGEV M K DF  
Sbjct: 138 RYENRKLKTAATRGDGTTGENVTANIRTIKEIPNELPAD-APDVVEVRGEVYMAKSDFLA 196

Query: 199 LNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLEGMEMPA----TH 254
           LN +  A  ++ + NPRN A+GSLRQLD+ +TA+R L FFAY +G +     PA    T 
Sbjct: 197 LNAQMEADGKQTYVNPRNTASGSLRQLDANVTAKRKLRFFAYALGEVSNGGQPARIADTQ 256

Query: 255 SELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYDIDGVVYKVNRRDEQDA 314
             +++ ++E G PVN        A+ LL  ++ +G  R  L YDIDGVVYKV+R D Q+ 
Sbjct: 257 YGIVEKFREWGFPVNPLMKRFTSAQQLLEHYNEIGVARPDLDYDIDGVVYKVDRLDLQER 316

Query: 315 LGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATVTNATLH 374
           LGF SR+PR+A AHKFPA++A T +  I++QVGRTGA+TPVARL P+ VGG  VTNATLH
Sbjct: 317 LGFRSRSPRWATAHKFPAEQAFTTVENIEIQVGRTGALTPVARLTPITVGGVVVTNATLH 376

Query: 375 NEDEV------------RRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPSDAREFVMPTQ 422
           N D +               DIRIGDTVIV+RAGDVIP+V+  LL++R + A ++V P +
Sbjct: 377 NADYIEGIGNSGERIRPEDHDIRIGDTVIVQRAGDVIPQVLDVLLEKRAAGAAKYVFPEK 436

Query: 423 CPVCGSSIERLPDE------AIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQ 476
           CPVCGS   R  +E      ++ RCTGG  C AQ  + L HF  R A DI+GLG K ID 
Sbjct: 437 CPVCGSHAVRERNEKTGKLDSVTRCTGGFVCRAQAVEHLKHFVSRNAFDIEGLGTKQIDF 496

Query: 477 LVEQN----LVRTPADLFNI-------GFATLAELDRFAEKSAQNLLDSLEKAKHTTLAR 525
             E +     ++T  D+F +           L  +D F + S + L D+++  +   L R
Sbjct: 497 FFESDDPALSIKTAPDIFTLKARQEASHLTKLENIDGFGKVSVKKLFDAIDARRAIDLHR 556

Query: 526 FIYALGIRHVGESTAKDLAKHFG-----------SLDPIMDASVEALLEVNDVGPVVAES 574
            I+ALGIRHVGE+TAK LA+ +G           + DP  DA  E L  ++ +G VVA +
Sbjct: 557 LIFALGIRHVGETTAKLLARSYGTYEHFEKAMKAAADPASDAWAE-LNSIDGIGEVVARA 615

Query: 575 IHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPKAPQGVLAGKTVVLTGTLPSLAREEAKE 634
           I +F+ E  N  VI++L    +   P+    P      +AGKTVV TG+L    R+EAK 
Sbjct: 616 IIEFYKEPRNLDVIDRLI---RELQPKEAEKPSTEGSPVAGKTVVFTGSLEKFTRDEAKA 672

Query: 635 MLEAAGAKVAGSVSKKTDYLVAGADAGSKLAKAEELGVPVLDEDGMRKLLEG 686
             E+ GAKVAGSVSKKTD LVAG  AGSKLAKA ELGV  +DED    L+ G
Sbjct: 673 RAESLGAKVAGSVSKKTDILVAGPGAGSKLAKATELGVQTMDEDEWLALIGG 724