Pairwise Alignments

Query, 511 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  191 bits (486), Expect = 4e-53
 Identities = 140/484 (28%), Positives = 213/484 (44%), Gaps = 17/484 (3%)

Query: 19  ACALAACSFGPSGEPPAMPQPAHYGAQAQPTQTVPAQGVTQQFVVGAKPVPEWWKLYRSD 78
           A  +A C+ GP  + P  P P  +  +     + P     +           WW+ +   
Sbjct: 15  AMLVAGCAVGPDYKTPDTPLPVSWKLEEPWRVSAPNDAADKG---------PWWRRFGDP 65

Query: 79  ALNALVDEGLRNSPTLAATDKSLAAAREQLRAQIGSSMLPTVDLGGQATR-----NRALA 133
            L+AL  + L  SPTLA  +  LA AR  L A   +   P V LG +A+R     NR L 
Sbjct: 66  QLDALQQQALAGSPTLAIANARLAQARATLAAN-AAGQYPQVGLGTRASRLRISANRPLT 124

Query: 134 IPEAGPNTFLYNIFVGQLQAHYTFDLFGAARLADAALAARVNVQAYQFDAARRALAANIV 193
                 +T + N F   L A Y  DL G  +       A     A      R  L+A++ 
Sbjct: 125 NYATPNSTTVQNDFALSLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVA 184

Query: 194 TAAITSAALHAQIETTERLVTIANDQARDTQRRYALGAVSHADQLSAQQSAASLSASLPG 253
           ++     +   +++   R + +          R+ LGAVS  D    Q    +    +  
Sbjct: 185 SSYFNLRSTDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDV 244

Query: 254 LKQQWLSTRHALAVLLGRTPDAAPDDLELAQLRVPEQVPVVVPSELLRARPDIQAADAAL 313
           L++Q     HALA L G    +    ++L ++R P  VP+ VPSE+L+ RPD+ +A+ A+
Sbjct: 245 LRKQRSQYEHALATLTGTPAPSFSLPVDLREIR-PPAVPLGVPSEILQRRPDVASAERAM 303

Query: 314 KAAAADVGVATAQMFPSLSLSASMGQGGFSWPVALSGAGAIWSIGASLSQPLFHGGALFA 373
            AA A +GVATA  +PS+ +S ++G    +     +G   +WS+G S +Q LF GG + A
Sbjct: 304 AAANAQIGVATAAFYPSIFISPTVGVDSRTIETLFNGPSLLWSVGVSATQVLFDGGRIRA 363

Query: 374 QRRAAVDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQALDAANIAARSAQGIFDETSG 433
               A   YD TV  Y++TVL A Q V D +  L     A   A  A  +A+ + D  + 
Sbjct: 364 NVDFAKAGYDVTVGNYRRTVLTAMQEVEDGITGLSALDSATAQAQAAVTAARRVLDMATS 423

Query: 434 RYRLGALPIASARSSEQQFRNAQLDEIRYTSARLTDTAALFQAMGNPPVG-TAADSAAAS 492
           RY  GA       +++Q     +    +    RL     L +A+G    G  AA  A   
Sbjct: 424 RYEGGASTYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDWCGDDAAGGAGCP 483

Query: 493 TAAS 496
           TAA+
Sbjct: 484 TAAA 487