Pairwise Alignments

Query, 511 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  297 bits (760), Expect = 7e-85
 Identities = 181/508 (35%), Positives = 274/508 (53%), Gaps = 10/508 (1%)

Query: 7   SRYSRGAALTGMACALAACSFGPSGEPPAMPQPAH---YGAQAQPTQTVPAQGVT---QQ 60
           +R+    A+ G A  L+AC+ GP  + P +P  A    Y     P++TV A+G     Q+
Sbjct: 25  ARWPVQGAVLGTALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPAGQAQE 84

Query: 61  FVVGAKPVPEWWKLYRSDALNALVDEGLRNSPTLAATDKSLAAAREQLRAQIGSSMLPTV 120
            V G     +WW ++RS+ L+ L+   L  SPTLA+   +L  A     A+ G+ + P V
Sbjct: 85  LVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGN-LWPQV 143

Query: 121 DLGGQATRNRALAIPEAGPNTFLYNIFVGQLQAHYTFDLFGAARLADAALAARVNVQAYQ 180
                  R RA  I    P   L  ++   +   Y  D+FG  R       A V+ Q YQ
Sbjct: 144 SAQLGVQRERASEISTQVPGGQLLTLYNASVNVSYNLDVFGGTRRQIEGAQAAVDTQRYQ 203

Query: 181 FDAARRALAANIVTAAITSAALHAQIETTERLVTIANDQARDTQRRYALGAVSHADQLSA 240
            +A    L +N+VT AI  A+L AQ++ T  ++    +Q    ++++  GA+  +  L  
Sbjct: 204 VEAVYLTLTSNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVLQQ 263

Query: 241 QQSAASLSASLPGLKQQWLSTRHALAVLLGRTP-DAAPDDLELAQLRVPEQVPVVVPSEL 299
           +   A   A+LP +++    TRH LAV  GR P +A   + +LA L +P+ +P+ +PSEL
Sbjct: 264 RTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLPQALPLSLPSEL 323

Query: 300 LRARPDIQAADAALKAAAADVGVATAQMFPSLSLSASMGQGGFSWPVALSGAGAIWSIGA 359
            R RPD++A++A L  A+A VGVATA ++P + LSAS G          +G   +W+IGA
Sbjct: 324 ARQRPDVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTTLWNIGA 383

Query: 360 SLSQPLFHGGALFAQRRAAVDTYDATVSQYKQTVLAAFQNVADTLAALEHDSQALDAANI 419
            L+QP+F+GGAL AQ+RAAV  YD+  +QY+ TVL AFQNVAD L ALE D+ AL     
Sbjct: 384 GLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIALQNQAA 443

Query: 420 AARSAQGIFDETSGRYRLGALPIASARSSEQQFRNAQLDEIRYTSARLTDTAALFQAMGN 479
           A   A+   D ++ ++R GA+   +  +++Q +       ++  +AR  DTAALFQA+G 
Sbjct: 444 AESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAALFQALGG 503

Query: 480 PPVGTA--ADSAAASTAASASASAIPAA 505
                A  A++  + T  SA A+A   A
Sbjct: 504 GWWNRAELANATLSPTVPSAPAAATTTA 531