Pairwise Alignments

Query, 577 a.a., voltage-gated chloride channel protein ClcB from Burkholderia phytofirmans PsJN

Subject, 592 a.a., Voltage-gated ClC-type chloride channel ClcB from Azospirillum sp. SherDot2

 Score =  174 bits (441), Expect = 9e-48
 Identities = 146/560 (26%), Positives = 258/560 (46%), Gaps = 30/560 (5%)

Query: 26  IWSVV----VGVAGAFATIAFREAIALLQFAIVGKSGSFVEMARGL-PWTVRIWLPAAGG 80
           IW  V    +G+  A    A   A+  L   +    G  V  A  + PW   + +P AGG
Sbjct: 34  IWLAVLAAGIGIVAACLVAAIVTAVQSLHHILFAVEGHDVSGAAAVDPWRAML-VPVAGG 92

Query: 81  -LIAGFLLLIARRYEDKCNHIDYMEAVAIGDGVVPVKLSMWRSVSSLFTISSGGSIGREG 139
            L+AG   L+AR    + + ID +EA A+  G +P+  S+   + ++ +   G S+G E 
Sbjct: 93  CLMAGLGWLLARL--PRLSIIDPVEANALHGGRIPIHGSLLLVLQTMLSNGFGASVGMEA 150

Query: 140 PMVQLAALAGSLIGRWVHFDPPRLRLLVACGAAAGITSAYSAPIAGAFFVTEIVLGSIAM 199
              Q  A+  S +GR  H     LR LV CG AA I +A+ AP+ GAF+  E+V+ S ++
Sbjct: 151 GYAQAGAMVASKLGRIFHVRRGDLRTLVGCGTAAAIAAAFDAPLTGAFYAFELVIASYSI 210

Query: 200 ESFGPVVVSAVVANITMREFAGYKPPYEMPVFPPVAGLEVLLFVALGALCGAAAPQFLRL 259
            +  PV V+A+     MR     +P  ++     +   +  L   +G LC       +R 
Sbjct: 211 STLAPVGVAAMTGVGVMRLILP-QPSLQVGFAGSLGAADYALVCLMGVLCALLGIAMMRT 269

Query: 260 LDLSKQSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNAILHSPWTWTALVLV 319
           + L +  F +  VP+  R  +GG  +G+L++ TP V  +G+  ++   ++ +T   L+ +
Sbjct: 270 VALVETVFNRSRVPVWARPIVGGCCIGLLALATPAVLSSGHGALHVGFNAYYTAPVLLAL 329

Query: 320 LVFKIVATAATAGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHGTSAP-FAYAMVGMG 378
           +  K +A+A + GSG  GG+F  +LF+GA++G L   G   +   G + P     +VGM 
Sbjct: 330 IGLKALASAISIGSGFRGGLFFASLFLGAMLGKLVAIGW--MLAVGLTIPAVVIGIVGMC 387

Query: 379 AFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYF-VSRAIGKNSMYEITLRRNHE 437
           A       APL    +  E+T S  + + ++ + VV+   V R  G    Y     R H 
Sbjct: 388 AMATAVLGAPLTMAFLALEVTGSLPLTIAVLAAAVVSSITVRRVFG----YSFATWRFHL 443

Query: 438 EQERSR-------LRATQMRELIRPAETVVPPNATVHDMTRVFLEYPVKYLYVANESGAF 490
             E  R       +R   +  ++R     V  + T+    R F     + + V +++  +
Sbjct: 444 RGESIRSAADVGWIRDLTVGRMMRKDVRTVRDDQTLAQFRRAFPLGATQRVIVVDQADRY 503

Query: 491 LGVVALKDITSDLLDGSDTSAKTAANYLQPHFDVLTPDMPLGVALQHFLAFQGERLPVVE 550
            G+V + D   +  + ++      A+ ++    VL P++ +  A++ F   + + L VV+
Sbjct: 504 AGIVFVSDAHRETAETAE-----LADLIRLKTKVLLPNVNIREAMKSFATAESDVLAVVD 558

Query: 551 SAAHPTLAGVVYKTSLLDAY 570
                 + G++ +   L  Y
Sbjct: 559 GPDRMRVIGLLTEQHALKRY 578