Pairwise Alignments

Query, 530 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 583 a.a., TPR repeat from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 6/176 (3%)

Query: 24  GELDAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVRYHEAIALDPRDKDSHHG 83
           G+L+ A   +  A    P +A     LA TL  L R  EA+  Y +A AL P D D    
Sbjct: 55  GQLERAAGYFGRAVQSSPQNADALNNLAYTLQQLGRDAEALAAYEQAQALLPDDADIAIN 114

Query: 84  LGWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCLQALGRFDEAHEAYRRAIEAAP 143
           LG   +++ +L +A+  +  A + +P       N GN LQ LGR  EA  +Y RA+ A P
Sbjct: 115 LGLLHKKLRQLPEALACFEHALQAHPAHVALLCNQGNVLQRLGRQQEALSSYERALTAEP 174

Query: 144 QVPLYYRNFVQS-KRLAADDPVFLAMERLVVDAASLTPANQAELHFAYGQALSDVG 198
             P+   N   +   LA  D      ER     AS      A+     G AL  +G
Sbjct: 175 DNPVVLCNLSNALNELARYDEALARAER-----ASQAHPKHAQAWVERGNALKQLG 225



 Score = 42.7 bits (99), Expect = 4e-08
 Identities = 32/127 (25%), Positives = 54/127 (42%)

Query: 25  ELDAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVRYHEAIALDPRDKDSHHGL 84
           +L  AL  +E A    P    +       L  L R  EA+  Y  A+  +P +      L
Sbjct: 124 QLPEALACFEHALQAHPAHVALLCNQGNVLQRLGRQQEALSSYERALTAEPDNPVVLCNL 183

Query: 85  GWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCLQALGRFDEAHEAYRRAIEAAPQ 144
              L ++ R ++A+     A++ +P+   +    GN L+ LGR  EA  +  +AI   P 
Sbjct: 184 SNALNELARYDEALARAERASQAHPKHAQAWVERGNALKQLGRIPEAVASCEKAIALDPA 243

Query: 145 VPLYYRN 151
           +   + N
Sbjct: 244 MVQAHTN 250



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 27  DAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVRYHEAIALDPRDKDSHHGLGW 86
           D AL R E A    P  A         L  L R PEAV    +AIALDP    +H  L  
Sbjct: 194 DEALARAERASQAHPKHAQAWVERGNALKQLGRIPEAVASCEKAIALDPAMVQAHTNLAA 253

Query: 87  TLEQMHRLEQAVDAYR 102
           T+     L  +VD  R
Sbjct: 254 TV-----LSDSVDTPR 264



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 22/48 (45%)

Query: 7   PAVAREWRAEGDACAARGELDAALQRYESARALDPTDALVQQRLAATL 54
           P  A+ W   G+A    G +  A+   E A ALDP        LAAT+
Sbjct: 208 PKHAQAWVERGNALKQLGRIPEAVASCEKAIALDPAMVQAHTNLAATV 255