Pairwise Alignments

Query, 530 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 652 a.a., type IV pilus biogenesis/stability protein PilW from Alteromonas macleodii MIT1002

 Score = 83.2 bits (204), Expect = 3e-20
 Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 28/256 (10%)

Query: 255 IFIVGMPRSGSTLIEQILASHPQVFGAGERTEFGEALVN-CIRRDLDDPLRIDIEALEEV 313
           +FIVG PRSG+TLIE +L  +  V    E T+  E   N  + R++ DP   DI+   + 
Sbjct: 411 LFIVGFPRSGTTLIESLLLKNANV-ELLEETDAVETFYNQMVEREIVDPETGDIKRTNQ- 468

Query: 314 GAAPLRALGVDYLRRMRNALPELQSRAQNDQRNPAANYTHFTDKYPFNFINLGLIHLALP 373
             + L AL  DYL  +    P + S                 DK P NF  L  +    P
Sbjct: 469 --SELDALANDYLEHLTAYSPSVDSNKL------------IVDKMPLNFPYLPAMLTLFP 514

Query: 374 NARFIHSSRAPLPTCLSIFSRIFHDVPFSYDLGELGRYYRAYDALMAHWQRVLP--EGVM 431
           NA+ +   R P    LS     F ++    +L  + ++  AY+ +   W+++ P      
Sbjct: 515 NAKVLCCLRNPKAVALSCLQ--FEEI----NLYTVEQFAEAYNKVFTCWEKMEPILRDRA 568

Query: 432 IEVKYEELVDDFEANVHRLLAHCGLEWDERCLSFYQTARQVNTASSAQVRRPLYKTSLQR 491
           I +KYE++V D E+++  +    GL   E       ++    T S  QV +P+YK+S+Q+
Sbjct: 569 ISIKYEDVVADPESSIASIYQFSGLTEGETKTLESNSSPLFQTPSYYQVSQPVYKSSMQK 628

Query: 492 WQPPRALLQ---PLLD 504
           ++    L     PLLD
Sbjct: 629 YENYPTLFSECPPLLD 644



 Score = 42.4 bits (98), Expect = 5e-08
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 9/128 (7%)

Query: 26  LDAALQRY---ESARALDPTDALVQQRLAATLA---ALNRFPEAVVRYH--EAIALD-PR 76
           ++ A+Q +   E +R +     + +Q   A +    AL +  E    +   E++  D P+
Sbjct: 8   INQAMQAFGAGEFSRVISTLSPVYEQHPMAKMVYATALGKVAEFTTSFEIFESLQSDYPQ 67

Query: 77  DKDSHHGLGWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCLQALGRFDEAHEAYR 136
           + D  +  G  L++  R + A     +A  +NP    + + +GN +  LGR +EA  AY 
Sbjct: 68  NTDVAYNYGLLLKEAERFDDAQKQLSKAIAINPNYHVAFHALGNLMSELGRNEEAQLAYE 127

Query: 137 RAIEAAPQ 144
           +AI   P+
Sbjct: 128 KAIAKNPK 135



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 26/98 (26%), Positives = 46/98 (46%)

Query: 25  ELDAALQRYESARALDPTDALVQQRLAATLAALNRFPEAVVRYHEAIALDPRDKDSHHGL 84
           E   + + +ES ++  P +  V       L    RF +A  +  +AIA++P    + H L
Sbjct: 50  EFTTSFEIFESLQSDYPQNTDVAYNYGLLLKEAERFDDAQKQLSKAIAINPNYHVAFHAL 109

Query: 85  GWTLEQMHRLEQAVDAYREATRVNPQADGSHNNMGNCL 122
           G  + ++ R E+A  AY +A   NP+      ++  CL
Sbjct: 110 GNLMSELGRNEEAQLAYEKAIAKNPKNIQYGQSLSKCL 147