Pairwise Alignments

Query, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

Subject, 832 a.a., Ribonuclease R from Xanthobacter sp. DMC5

 Score =  363 bits (931), Expect = e-104
 Identities = 262/823 (31%), Positives = 400/823 (48%), Gaps = 76/823 (9%)

Query: 18  IPSREEILGVLRTSEAPLAANDIAEALSIKRQEREGFFKRLGAMERDGQIRLDQRNLYQL 77
           +P++ ++L  + T    +   +IA A  +   ++    + L  +  +G +  ++R L+  
Sbjct: 61  MPTKAQVLAFIATQNGEVGKREIARAFGLSAAQKVELKQLLRDLSAEGTVSRERRRLHVP 120

Query: 78  -THPSNFVAGRVQGHRDGYGFLIRD----DGQDDLFLPTAEMQKVMH--------NDRVL 124
              P+  +A  V   RDG G L+      D +     P   +Q            +DRVL
Sbjct: 121 GALPAEVLADIVS--RDGDGELVAVPVEWDSEAQGEAPHILVQVPRRASGPAPGLSDRVL 178

Query: 125 ARIV-GYDRRGRPE-GHIVEVTDRANKRVIG--RLLNENGALIVAPEDKR-IGHDILIQQ 179
            RIV G      P  G +++V ++A K+ +G  R   + G   + P DK+ +G ++ +  
Sbjct: 179 LRIVEGSIEHAVPHVGRVIKVLEKARKQTMGIFRAAPQGGGGRIIPIDKKQLGRELQVPP 238

Query: 180 NTK-KAKVGQVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQA 238
             + +A+ G +V VEL         P  RV E LG +        IA+  +G+P+ F   
Sbjct: 239 GAEHEAEDGDLVTVELMR-QRVFGLPTARVKEKLGSLKSEKAVSLIAIHAHGIPNAFPDV 297

Query: 239 ALDEASRLPDEVRPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCEPVQVGRGEGFRLIV 298
            L EA    +  + +  R R D RD+PLVTID  DA+D DDAV+    + G   GF + V
Sbjct: 298 VLKEA----EAAKQITVRGREDWRDLPLVTIDPPDAKDHDDAVHAAADEDG---GFIVTV 350

Query: 299 AIADVSHYVHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRCVLVCDM 358
           AIADVS YV P + LD +A+ R  SVYFP RV+PMLPE++SN LCSL P  DR  L   +
Sbjct: 351 AIADVSAYVRPGTALDREALIRGNSVYFPDRVVPMLPERISNDLCSLRPDEDRPALAVRL 410

Query: 359 IITARGEVKAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEATRRAALLPQLQNLYGVYKS 418
           +I   G  +++ F+  +M SA +L Y +    ++     +      +   L+ LY  Y  
Sbjct: 411 VIGGDGRKRSHSFHRILMRSAGKLAYAQAQNAIEGRT--DDITDPLVEGVLKPLYAAYAC 468

Query: 419 LFAARQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCAADFLKR 478
           +  AR  R  +D D  E  I+    G +++++   R DAH+LIEE M+ ANV AA+ L+ 
Sbjct: 469 VKKARDARQPLDLDLPERKIILKPDGTVDRVVVPERLDAHRLIEEFMILANVAAAETLEE 528

Query: 479 NKHPGLFRVHAGPTAEKLENLRTFLRGMGLTLAGGDKPHASDYAALMAQIRERPDAQMLQ 538
            K P ++RVH GPT  KL  LR FL+ + + L   D+   S +  ++ ++++   A ++ 
Sbjct: 529 KKTPLIYRVHDGPTLAKLSALRDFLKTLDIGLPKTDQVRPSHFNRILEEVKDTDAAPLVN 588

Query: 539 TMLLRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYQPEPP 598
            ++LRS  QA Y+ +N GHFGL    YAHFTSPIRRY DL+ HR +   L          
Sbjct: 589 QVILRSQSQAEYASENYGHFGLNLRRYAHFTSPIRRYADLIVHRGLVRAL---------- 638

Query: 599 QGVELNTALSPRARAMQQADDEKRGRVRGNNVAIWEELGLHCSANERRADEASRDVEAWL 658
            GV                   K G      V    E+    S  ERRA  A R+    L
Sbjct: 639 -GV------------------GKDGLPDDATVESLGEVAAAISVTERRAMAAERETVDRL 679

Query: 659 KCYFMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIKNELRGE 718
             + + D++G  + G + G T  G+FV LD    +G +  + LG DY++YDE++  L G+
Sbjct: 680 IAHHLADQIGATFNGRITGATKAGLFVALDITGADGFIPASTLGQDYYRYDEVRQALVGD 739

Query: 719 RTGIRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVRGPSADKSSGENGGARVRA 778
           RTG  +R+ DRV V++      A  + F L+ +       V+GP         GG + R 
Sbjct: 740 RTGEMHRIGDRVEVKLVEAAPVAGALRFELLSE----GSYVKGP-------RGGGPQRRG 788

Query: 779 LPPAEGGAPA---PGARRKKAAPAQTAAVKEARAARGAAKKHG 818
            P    G P    PG  R K   + +      +A+ G AK  G
Sbjct: 789 APSGFAGRPGKSLPG--RAKPGKSGSGKSGSGKASPGKAKPGG 829