Pairwise Alignments

Query, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

Subject, 839 a.a., ribonuclease R from Pseudomonas sp. S08-1

 Score =  703 bits (1815), Expect = 0.0
 Identities = 392/829 (47%), Positives = 513/829 (61%), Gaps = 33/829 (3%)

Query: 13  KFPYPIPSREEILGVLRTSEAPLAANDIAEALSIKRQERE-GFFKRLGAMERDGQIRLDQ 71
           K+  PIPSRE IL  L    +P A  ++   L +  +E+E    +RL AMERDGQ+   +
Sbjct: 17  KYENPIPSRELILQHLAERGSPAAREELLAELGLTTEEQEEALRRRLRAMERDGQLIYTR 76

Query: 72  RNLYQLTHPSNFVAGRVQGHRDGYGFLIRDDGQDDLFLPTAEMQKVMHNDRVLARIVGYD 131
           R  Y      + + GR+ GHRDG+GFL+ DDG DDLFL  A+M+ V   DR LAR+ G D
Sbjct: 77  RGTYAPVDKLDLICGRISGHRDGFGFLVPDDGSDDLFLSPAQMRLVFDGDRALARVSGLD 136

Query: 132 RRGRPEGHIVEVTDRANKRVIGRLLNENGALIVAPEDKRIGHDILIQQN-TKKAKVGQVV 190
           RRGR EG IVEV  RA++ ++GR   E G   V  ++ +I  ++L+    T  AK+GQ V
Sbjct: 137 RRGRREGAIVEVIARAHESIVGRYFEEAGIGFVEADNPKIQQEVLVTPGRTGGAKIGQFV 196

Query: 191 VVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQAALDEASRLPDEV 250
            +++T +P+   QP G +VEV+G+   PGMEI++A+R Y +PH +  A   EA +L  +V
Sbjct: 197 EIKITHWPTSRFQPQGDIVEVIGNYMAPGMEIDVALRSYDIPHVWPDAVTKEARKLKPQV 256

Query: 251 RPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCEPVQVGRGE----GFRLIVAIADVSHY 306
              D  +R+DLR +P VTIDGEDARDFDDAVYCE    GR +    G++L VAIADVSHY
Sbjct: 257 EEKDKENRVDLRHLPFVTIDGEDARDFDDAVYCEK-NSGRWKLFSGGWKLYVAIADVSHY 315

Query: 307 VHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRCVLVCDMIITARGEV 366
           V   + LD +A +R  SVYFP RV+PMLPE+LSNGLCSLNPHVDR  +VC+M ++  GE+
Sbjct: 316 VKVGAALDEEAQKRGNSVYFPERVVPMLPEELSNGLCSLNPHVDRLAMVCEMSMSKSGEL 375

Query: 367 KAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEAT----RRAALLPQLQNLYGVYKSLFAA 422
             YQFY  V+HS ARLTY +V+ +L+  K  E          +LP L+ LY +YK L AA
Sbjct: 376 VDYQFYEAVIHSHARLTYNKVSYMLEQPKSSEGKALRDEYKEVLPHLKELYSLYKVLLAA 435

Query: 423 RQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCAADFLKRNKHP 482
           R +RGAIDF+T ET IV  +  KI +I P  RNDAHKLIEECMLAANV  A F+  ++ P
Sbjct: 436 RHERGAIDFETQETRIVFGSGRKIAEIRPTQRNDAHKLIEECMLAANVATARFMLDHEIP 495

Query: 483 GLFRVHAGPTAEKLENLRTFLRGMGLTLAGGDK-PHASDYAALMAQIRERPDAQMLQTML 541
            L+RVH GP AE++E L+ FL  +GL L  G + P   DY  L+A I+ RPD  ++QT++
Sbjct: 496 SLYRVHDGPPAERVEKLKAFLGELGLALHKGKQGPVPKDYQKLLASIQGRPDFHLIQTVM 555

Query: 542 LRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYQPEPPQGV 601
           LRS+ QAVYS DN GHFGL YEAY HFTSPIRRYPDLL HRAI ++++ ++   E     
Sbjct: 556 LRSLSQAVYSADNNGHFGLNYEAYTHFTSPIRRYPDLLVHRAIRSVIRSKR---ETKHVQ 612

Query: 602 ELNTALSPRARAMQQADDEKRGRVRGNNVAIWEELGLHCSANERRADEASRDVEAWLKCY 661
               A  P+AR     +            A  E+LG  CS  ERRADEA+RDV  WLKC 
Sbjct: 613 RAGAASMPKARIYPYDE------------AALEKLGEQCSMTERRADEATRDVVNWLKCE 660

Query: 662 FMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIKNELRGERTG 721
           FM+D++GE + G++   T FGIFV+L  +++EGLVHVT L  DY+ +D + + L GER+G
Sbjct: 661 FMQDRVGETFEGVITAATGFGIFVELKDIYVEGLVHVTALPGDYYHFDPVHHRLSGERSG 720

Query: 722 IRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVRGPSADKSSGENGGARVRALPP 781
             +RL D V V+V RVDLD RKI+F L      K P  RG      +G +G  +      
Sbjct: 721 RSFRLGDSVEVKVMRVDLDERKIEFELSEGKADKAPSGRG-----RAGSDGRKKPAPKSA 775

Query: 782 AEGGAPAPGARRKKAAPAQTAAVKEARAARG-AAKKHGAATKSAPKPQA 829
             G      +R  K A    A     +A  G  A K G   K APK  A
Sbjct: 776 GFGNTDVQKSRDVKKALLDGAKKSGGKAPAGKPAGKAGGHRKGAPKADA 824