Pairwise Alignments

Query, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

Subject, 878 a.a., ribonuclease R from Pseudomonas fluorescens SBW25

 Score =  733 bits (1893), Expect = 0.0
 Identities = 410/854 (48%), Positives = 535/854 (62%), Gaps = 50/854 (5%)

Query: 13  KFPYPIPSREEILGVLRTSEAPLAANDIAEALSIKRQER-EGFFKRLGAMERDGQIRLDQ 71
           K+  PIPSRE IL  L    +P +   + E   +  +++ E   +RL AMERD Q+   +
Sbjct: 17  KYENPIPSRELILAHLADRGSPASREQLVEEFGLTTEDQLEALRRRLRAMERDAQLIYTR 76

Query: 72  RNLYQLTHPSNFVAGRVQGHRDGYGFLIRDDGQDDLFLPTAEMQKVMHNDRVLARIVGYD 131
           R  Y      + + GR+ GHRDG+GFLI DDG DDLF+  A+M+ V   DR LAR+ G D
Sbjct: 77  RGTYAPVDKLDLILGRIAGHRDGFGFLIPDDGSDDLFMSPAQMRLVFDGDRALARVSGLD 136

Query: 132 RRGRPEGHIVEVTDRANKRVIGRLLNENGALIVAPEDKRIGHDILIQQNTK-KAKVGQVV 190
           RRGR EG IVEV  RA++ ++GR   E G   V P++ ++  ++LI       AKVGQ V
Sbjct: 137 RRGRREGVIVEVVSRAHESIVGRYFEEGGIGFVVPDNPKVQQEVLITPGRNGAAKVGQFV 196

Query: 191 VVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQAALDEASRLPDEV 250
            V++T +P+   QP G +VEV+G+   PGMEI++A+R Y +PH + +A L EA++L  EV
Sbjct: 197 EVKITHWPTARFQPQGDIVEVVGNYMAPGMEIDVALRTYDIPHVWPEAVLKEAAKLKPEV 256

Query: 251 RPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCEPVQVGR----GEGFRLIVAIADVSHY 306
              D   RIDLR +P VTIDGEDARDFDDAVYCE  + G+      G++L VAIADVS Y
Sbjct: 257 EEKDKEKRIDLRHLPFVTIDGEDARDFDDAVYCE-AKPGKLRLFSGGWKLFVAIADVSSY 315

Query: 307 VHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRCVLVCDMIITARGEV 366
           V   S LD +A  R  SVYFP RVIPMLPE+LSNGLCSLNP VDR  +VC+M I+  GE+
Sbjct: 316 VKIGSALDNEAQVRGNSVYFPERVIPMLPEQLSNGLCSLNPKVDRLAMVCEMTISKTGEM 375

Query: 367 KAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEATRRAA----LLPQLQNLYGVYKSLFAA 422
             YQFY  V+HS ARLTY +V+ +L+  K  EA         ++P L+ LY +YK L  A
Sbjct: 376 TDYQFYEAVIHSQARLTYNKVSTILEQPKTSEAKALRGEYGHVVPHLKQLYALYKVLLGA 435

Query: 423 RQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCAADFLKRNKHP 482
           R  RGAIDF+T ET IV  ++ KI  I P TRNDAHKLIEECMLAANV  A+FLK+++ P
Sbjct: 436 RHVRGAIDFETQETRIVFGSERKIAAITPTTRNDAHKLIEECMLAANVATAEFLKKHEIP 495

Query: 483 GLFRVHAGPTAEKLENLRTFLRGMGLTL-AGGDKPHASDYAALMAQIRERPDAQMLQTML 541
            L+RVH GP  E+LE LR FL  +GL+L  G D P   DY AL+A I++RPD  ++QT++
Sbjct: 496 ALYRVHDGPPPERLEKLRAFLGELGLSLHKGKDGPTPKDYQALLASIKDRPDYHVIQTVM 555

Query: 542 LRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYQPEPPQGV 601
           LRS+ QAVYS DN GHFGL YEAY HFTSPIRRYPDLLTHRAI +++  ++         
Sbjct: 556 LRSLSQAVYSADNQGHFGLNYEAYTHFTSPIRRYPDLLTHRAIRSVIHSKQ--------- 606

Query: 602 ELNTALSPRARAMQQADDEKRGRVRGNNVAIWEELGLHCSANERRADEASRDVEAWLKCY 661
             NT    RA AM       + R+   + A  E+LG  CS +ERRADEA+RDV  WLKC 
Sbjct: 607 --NTPHVQRAGAMTIP----KARIYPYDEAALEQLGEQCSMSERRADEATRDVVNWLKCE 660

Query: 662 FMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIKNELRGERTG 721
           FM+D++GE + G++  VT FG+FV+L  +++EGLVHVT L  DY+ +D + + L GERTG
Sbjct: 661 FMKDRVGESFPGVITAVTGFGLFVELTDIYVEGLVHVTALPGDYYHFDPVHHRLAGERTG 720

Query: 722 IRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVR-----GPSADKSSGENGGARV 776
             +RL D V VQV RVDLD RKIDF +  D P + P  R      P+A  S G+   A+ 
Sbjct: 721 RSFRLGDTVEVQVMRVDLDERKIDFGM-PDKPAEAPNSRKKRGSEPAAPASKGKGAPAKA 779

Query: 777 RALPPAEGGA--------PAPGARRKKAAPAQTAAVKEAR---------AARGAAKKHGA 819
            A  PA   A         AP A R   A A+ A ++++R         A  G     G 
Sbjct: 780 AAAEPAPAKAGRRSSAKDKAPEAYRPSDAAAKNAELRKSRELKQQLLNEAKSGGKAASGG 839

Query: 820 ATKSAPKPQARKKR 833
            ++ A KP ++  +
Sbjct: 840 KSREAEKPSSKPSK 853