Pairwise Alignments

Query, 432 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  139 bits (349), Expect = 3e-37
 Identities = 104/350 (29%), Positives = 160/350 (45%), Gaps = 56/350 (16%)

Query: 115 MTVLTDISRQVAAERRARQTESWLAGIYTSVNDFAFFSLDAEGRIESWNPSV-------- 166
           +T+ TDI+ +  AE   R  E  L  I+ + +  A F++D+ GRI + N  +        
Sbjct: 117 ITLYTDITERREAEETLRDKEGLLRLIFDN-SSVAIFTIDSSGRIGAANQRMAEMFMMPL 175

Query: 167 ERLTGFDETDVVGHTLSRFYARDEIVLHRSPEHIALTRDEGWHVEEFWCDTKTGRRYWGQ 226
           E L G +  D+V           E       +H+   R +      +W     G  +WGQ
Sbjct: 176 ESLIGMEYVDLVDPV------EQETARKNMADHLLQDRPDVNLERHYW--RSNGTAFWGQ 227

Query: 227 VLIAVLREEGDDISGYSVVLRDVTERKVSSDNLA-------------------------- 260
           +  + +    D  +G   V+ D+TERK++  +LA                          
Sbjct: 228 LTASHMPAYRDGRAGLVCVVSDITERKIAEQHLAERSHELEILNLELTKAVEALAASNAE 287

Query: 261 ---------RLLTTDHLTGVSSRAHFFEIAEAEVARAERHGRALSVVMLDADYFKRINDT 311
                    +L   D+LTG  SR    E A+ E+ R  R+G  +S++ +D D+FK++ND 
Sbjct: 288 LVAAREELEQLAQHDNLTGTWSRRRIEESAQQEMLRKTRYGHPVSLIFIDLDHFKKVNDG 347

Query: 312 AGHQAGDEVLKRIAGEAKGLLRTSDTVARLGGEEFILMLPSTTTSEAVAVAERLRVAVER 371
            GH AGDEVLK     A+  +R++D + R GGEEF+++ P++    A+ +AER+R A+  
Sbjct: 348 HGHAAGDEVLKTFCDIAQKCMRSTDLLGRWGGEEFVIVTPNSGLMIAILLAERIRKAIMA 407

Query: 372 ARIDTAVGTLKATVSLGVATVSTANPTLQSLLAAADRALYDAKRAGRNCV 421
                  G    T S GVA       T +S L  +D ALY AK  GRN V
Sbjct: 408 YEFQ---GIGHVTASFGVAEY-REEETWESWLCRSDAALYAAKEGGRNRV 453