Pairwise Alignments

Query, 485 a.a., histidine kinase from Burkholderia phytofirmans PsJN

Subject, 466 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 90/401 (22%), Positives = 166/401 (41%), Gaps = 30/401 (7%)

Query: 17  RGDFPMLSQSLRSTMAAMNNDDLDFTGLVQVVLSDFALTQKVLRLANSAMYMAFGGNITT 76
           + + P L+  ++        D      L  V+L D +LT KVLR+ NS  Y     +I T
Sbjct: 3   QAELPALAAVVQDLHRLSQADKASVQQLADVLLRDASLTSKVLRVGNSVYYNPSQESIRT 62

Query: 77  VSRALMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTLLSGCVARKLTERGDLR 136
           +SRA++++G D V  + + + ++D      PR    ++ L R+  +   AR +      +
Sbjct: 63  ISRAIVLIGFDNVRLIGMSVSLIDSLLTRVPRE-QLQMLLARSFHAAVQARNIAGYVLTK 121

Query: 137 AGEEAVVCTLMRQIGKLLVVFYLDAEWDQIRRHIDDGALEA-DACVLVLGVTFDEIGAEA 195
             EE  +  L+  +G+L        + D++   ++   +E  DA   VLG+TF ++    
Sbjct: 122 NQEEVFIAALLHTVGELAFWACGGEQADELADALEQPGVEMDDATRQVLGLTFRQLTQGL 181

Query: 196 AVRWRLPDMIRSGMGEFDPQDVTQPRQVQWLRAITNYSTAVADVLTQQNMPDWE--REER 253
              W L ++     G  +  D         +RAI     ++   +++  +  W+    E+
Sbjct: 182 VKSWNLGELAAFAHGSGNQHDPA-------VRAI-----SLGVKISEAALEGWDSPEMEK 229

Query: 254 IAELAQEYSGALNTDPEVLLQMSVALAREEGGDGVMREIVELRANAD-------AIAREA 306
           + E   E++G    D    +  S   A E        ++ +L  N D          R+A
Sbjct: 230 LVEQLAEFTGVSAEDALKQVLESAQEAVEVAATFGASQLCKLIPNTDPEQIKLQQQERKA 289

Query: 307 LSPEARIAVGVQDLRGLPESSPLAPALALAAETLLAGL----GFARTVVFVKHSNGT-FK 361
              +  + V  Q L+ L         + L  +TLL GL    G  R ++ V     T F+
Sbjct: 290 RLLQPNLLVLQQALQDLGMMVNQKGDVGLILDTLLKGLHQGAGLERVMLTVLADGQTAFR 349

Query: 362 ARLGLGPKIDAALP--KLTFNTAFEPDVFHLAIANSVGIFI 400
           A+  +G   +  L   +L    A +P +F  A+ N   +++
Sbjct: 350 AKRAVGEGTEQWLTDFQLPAKQAEQPHIFSYALRNREALWM 390