Pairwise Alignments

Query, 346 a.a., porin from Burkholderia phytofirmans PsJN

Subject, 350 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  131 bits (330), Expect = 2e-35
 Identities = 114/373 (30%), Positives = 172/373 (46%), Gaps = 50/373 (13%)

Query: 1   MKTKTLVSGALMLACAGAHAQSKIWLSGYVDLNIEHLISSG-SGGNVTRMSSGGLNNSRF 59
           MK + +V+   ++ C GAHAQ+ + L G +D N+E L  +G SGG++ R +SGGL+NSRF
Sbjct: 1   MKKQCVVAALGVVPCVGAHAQASVTLYGVIDTNLEFLNHAGASGGSLVRENSGGLSNSRF 60

Query: 60  NLSGVEDLGGGNKAVFTIEPMFSANTGVQSAQ----FRQSFVGLKGNWGEITMGRQFTPS 115
              G EDLGGGNKA F +E  F+ N G  ++      R + VGL   +G ++ G Q+T  
Sbjct: 61  GFRGAEDLGGGNKAFFILEAGFNGNDGTNASAGVLFNRTAAVGLSNAYGALSAGLQYTAM 120

Query: 116 YWIAGYADP-------SWAADFSMVNNMEFFYASYRVDNAIQYKTPTFYGFTGRIMATT- 167
           Y      DP       +W       +   F     RV+N+++Y      G  G + AT  
Sbjct: 121 YDTLIKYDPMAFGQQYTWMPTTGSADGFSF---KARVNNSVKY-----VGRFGGLTATAD 172

Query: 168 ----GVGDSTRAGRFLSTSIDYRHGPIFIGAVSELQYTRDIFRSSQIHSSRDNYFSA--- 220
               G  DS ++      ++DY  G  F  AV+   Y      ++ + +   N+ ++   
Sbjct: 173 YSFGGSADSFQSSAAYGGALDYNTGS-FAAAVA-YDYRNGAVNATGMWTKSRNWSASARE 230

Query: 221 ----VYKFGGFEPTVIYHTYNGYYAFPPY--VAFNSQGWDAQIGARWNIDGRNRVYLSVV 274
               V   GG+E          +Y F P    + +S  W    G R+ +    R+  S  
Sbjct: 231 QLGDVTLMGGYE----------HYLFNPTKGKSVSSALWFG--GVRYLVTPAFRL-TSAA 277

Query: 275 HRHDDNNTSISSATGGVIGYIYGLSKRTDLYATFAHVKHQHDVPVPY-PVTFQVYPNSGQ 333
           +   +   ++S++  GV+   Y LSKRTD+YAT A+    H     Y PV        G 
Sbjct: 278 YYQSNKADNVSNSLMGVLSADYILSKRTDVYATVAYAASMHYANDQYTPVGLTSDTAFGP 337

Query: 334 NPSGFQFGIRHAF 346
           N  G   GIRH F
Sbjct: 338 NQIGVTLGIRHRF 350