Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

Subject, 321 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  202 bits (513), Expect = 1e-56
 Identities = 125/335 (37%), Positives = 186/335 (55%), Gaps = 19/335 (5%)

Query: 6   TEAVQSGRALRFAHRLYALGPLVGLIALCVIGTLLNRDFATVDNLMNVLTRTSFIGIIAV 65
           T+AV SGR       L     L+ L+ L  I + ++ +F TV+NL N+L +TS   I+AV
Sbjct: 3   TQAV-SGRRYFTKAWLMEQKSLIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAV 61

Query: 66  GMTFVIISGGIDLSVGSMAALIAGSMIWLMNGLAAGVGGHAFPPLMILTLGIVGALMLGG 125
           GMT VI++ GIDLSVGS+ AL           +AA + G     L+     +  AL  G 
Sbjct: 62  GMTLVILTSGIDLSVGSLLALTGA--------IAASIVGIEVNALV----AVAAALAAGA 109

Query: 126 LFGCAHGLLITKGRIEPFIVTLGTLGIFRAVLTWLADGGALTL---DNSLSDLYGPVYYA 182
             G   G+++ KGR++ FI TL  + + R V     +G  +     DN+  DL+G     
Sbjct: 110 AIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTDNA--DLFGWFGIG 167

Query: 183 SLFGVPVPIWVFLVVAAGGALILNRTAFGRHVQAIGSNEQVARYAAIRVDTVKIVTYVLL 242
              GVP P+W+  +V      +L+ T  GR++ A+G NE   R + I V+ VKI+ Y L 
Sbjct: 168 RPLGVPTPVWIMAIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLC 227

Query: 243 GICVGVATVLYVPRLGSTTPTTGLLWELEAIASVVVGGTALKGGEGRVIGTVIGAILLSV 302
           G+   +A ++ V RL S  PT G  +EL+AIA+VV+GGT+L GG+GR++GT+IGA++L  
Sbjct: 228 GLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGF 287

Query: 303 IANILNLTSIISVYLNAAVQGVVIIFVAFVQRGRR 337
           + N LNL   +S Y    V+ VVI+    V   ++
Sbjct: 288 LNNGLNLLG-VSSYYQMIVKAVVILLAVLVDNKKQ 321