Pairwise Alignments

Query, 613 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

Subject, 352 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 61.2 bits (147), Expect = 7e-14
 Identities = 79/301 (26%), Positives = 120/301 (39%), Gaps = 34/301 (11%)

Query: 208 HVLQDLLKNDMNRPEAQLAIARQQLVSDD-APGARKSLEQALALKPDYLPAALTLSQM-- 264
           H     LK   N       +  QQL   D +P  R +L   L   P   P AL L+    
Sbjct: 39  HGYSKALKQARNGEPGAARVLYQQLGRPDLSPERRAALHAELPNYPS--PQALKLADKDL 96

Query: 265 ---GPEERKEGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFEIMHKNNANEL 321
               P  R+  I S+   V    ++           L    LDD ++       N    L
Sbjct: 97  ASESPLVREAAIHSIVGLVPTGQRT----------LLLGPVLDDPEQAVRFAAANALLGL 146

Query: 322 TPLMALALIKIQQKNFNEAQAYLTQYAQQAEKTPGADPGQAYIYLAQLSLEQKNEAAASD 381
           +P   L L       F  +Q  L ++ ++ +  P  +  + +I LA+L +       A +
Sbjct: 147 SP-DTLGLY------FGPSQQVLDEFVKKLKAQP--ETAEGWIQLARLYIHSALLPEAQN 197

Query: 382 WLN---KISPSSQQYVPAQITRAQLLAKQGKVDDARKLLANLPAPDPRDQALLMRTDAAI 438
            L    ++ P + Q V AQI   +LL KQGK D++R+LLA   A  P    L       +
Sbjct: 198 ALEQAMRLQPDNLQAVVAQI---ELLDKQGKTDESRQLLARQLAAHPESAYLQHALGMWL 254

Query: 439 LFDAKRYPEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQTQPDNPQ 498
           L   +R P A   L +A    PD+ D  YD A +       +  + QL +++Q  P N +
Sbjct: 255 LHHGER-PYALLGLSKAVELEPDNQDYRYDLATTLHAQQELEAAQRQLEEVVQRHPANRK 313

Query: 499 A 499
           A
Sbjct: 314 A 314



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 78/360 (21%), Positives = 135/360 (37%), Gaps = 68/360 (18%)

Query: 77  GVPLTSQIVFQVLAAEVALQRDQPAPAYQTYLALARDTHDPRMAQRATEIALAAQSPSDA 136
           G P  +++++Q L       R   +P  +  L      +    A +  +  LA++SP   
Sbjct: 51  GEPGAARVLYQQLG------RPDLSPERRAALHAELPNYPSPQALKLADKDLASESPLVR 104

Query: 137 LAAAQLWQQYAPNSERAAQLDASLLVLSGKPDDASPILARELARVPADNRGSAILALQLL 196
            AA        P  +R        L+L    DD       +  R  A N    +    L 
Sbjct: 105 EAAIHSIVGLVPTGQRT-------LLLGPVLDDPE-----QAVRFAAANALLGLSPDTLG 152

Query: 197 LSRGPNRIGGLHVLQDLLKNDMNRPEAQ---LAIARQQLVSDDAPGARKSLEQALALKPD 253
           L  GP++     VL + +K    +PE     + +AR  + S   P A+ +LEQA+ L+PD
Sbjct: 153 LYFGPSQ----QVLDEFVKKLKAQPETAEGWIQLARLYIHSALLPEAQNALEQAMRLQPD 208

Query: 254 YLPAALTLSQMGPEERK--EGIASLEKYVQQNPKSHDARLALAQMYLASDRLDDAQKQFE 311
            L A +   ++  ++ K  E    L + +  +P+S   + AL  M+L    L   ++ + 
Sbjct: 209 NLQAVVAQIELLDKQGKTDESRQLLARQLAAHPESAYLQHALG-MWL----LHHGERPYA 263

Query: 312 IMHKNNANELTPLMALALIKIQQKNFNEAQAYLTQYAQQAEKTPGADPGQAYIYLAQLSL 371
           ++  + A EL P                                     Q Y Y    +L
Sbjct: 264 LLGLSKAVELEP-----------------------------------DNQDYRYDLATTL 288

Query: 372 EQKNEA-AASDWLNKISPSSQQYVPAQITRAQLLAKQGKVDDARKLLANLPAPDPRDQAL 430
             + E  AA   L ++         A++       + G++ + + LLA L   +P D AL
Sbjct: 289 HAQQELEAAQRQLEEVVQRHPANRKARVLLINYWKESGQLQNVQVLLAQLEQQNPDDPAL 348



 Score = 31.2 bits (69), Expect = 8e-05
 Identities = 35/161 (21%), Positives = 57/161 (35%), Gaps = 2/161 (1%)

Query: 446 PEAETRLQQATAQFPDDPDLTYDYAMSAEKTGHYDVMEAQLRKLIQTQPDNPQAYNALGY 505
           PEA+  L+QA    PD+           +K G  D     L + +   P++    +ALG 
Sbjct: 193 PEAQNALEQAMRLQPDNLQAVVAQIELLDKQGKTDESRQLLARQLAAHPESAYLQHALGM 252

Query: 506 SLADRNQRLAEADKLVEKASSLAPNDAFIMDSVGWVKYRMGDTSDAIRLLRKAYDMQPNA 565
            L    +R   A   + KA  L P++      +    +   +   A R L +     P  
Sbjct: 253 WLLHHGER-PYALLGLSKAVELEPDNQDYRYDLATTLHAQQELEAAQRQLEEVVQRHPAN 311

Query: 566 EIGAHLGEVLWK-TGNQDQARAAFRDARKLEPDNDTLVKTL 605
                L    WK +G     +       +  PD+  L + L
Sbjct: 312 RKARVLLINYWKESGQLQNVQVLLAQLEQQNPDDPALQQGL 352