Pairwise Alignments

Query, 854 a.a., N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) from Burkholderia phytofirmans PsJN

Subject, 833 a.a., putative PTS enzyme: Hpr, enzyme I and II components from Escherichia coli BL21

 Score =  320 bits (820), Expect = 2e-91
 Identities = 224/676 (33%), Positives = 342/676 (50%), Gaps = 37/676 (5%)

Query: 189 GLHARPAARAREAARGFDARVEVRY--EGRKAAIESVVGLLGLGAGEGATVELLGMGPQA 246
           G+HARPA+        F +++E       RK   +S + L+G     G   +LL  G   
Sbjct: 14  GVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLVGDNCQLLISGADE 73

Query: 247 AAAVAAIANELTRE---AHGEVEEKPARQSSPAPQAVARPAGETLAPNTLAGVCAAPGVA 303
             A   ++  L  E       + E  + +  P P ++       L P  +       G A
Sbjct: 74  QEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTN-----LNPQIIRARTVCSGSA 128

Query: 304 VGKLVRWDDADIDPPEK---ANGTSAAESRLLDKAIATVDADLDTTVRDASQRGAVGEAG 360
            G L      D++       A G  A +S L +  +  V  +++  + D+   GA   + 
Sbjct: 129 GGILTPISSLDLNALSNLPAAKGVDAEQSAL-ENGLTLVLKNIEFRLLDSD--GAT--SA 183

Query: 361 IFSVHRVLLEDPTLLDAARDLISLGKSAGFAWREAIRAQI----AILTNIEDALLAERAA 416
           I   HR L  D +L    R+ +  G SAG +  EAI A              + L ERA 
Sbjct: 184 ILEAHRSLAGDTSL----REHLLAGVSAGLSCAEAIVASANHFCEEFARSSSSYLQERAL 239

Query: 417 DLRDIEKRVLRAL--GYTSATARTLPEEAVLAAEEFTPSDLSTLDRSRVTALVMARGGAT 474
           D+RD+  ++L+ +           L + A+  A+E TPS    LD++ +  L++  GG T
Sbjct: 240 DVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTT 299

Query: 475 SHAAILARQAGIPALVAVG-DALHAIPEGTQVVVNATTGRLEFAPTELDVERARLERTRL 533
           SH  ILAR   IP LV V  DAL      T + ++   G +   P E  V R   +  R+
Sbjct: 300 SHTVILARSFNIPTLVGVDIDALTPWQHQT-IYIDGNAGAIVVEPGEA-VARYYQQEARV 357

Query: 534 AD-VREANRRTSQQAAVTSDGRAIEVAANIATLDDAKTAVENGADSVGLLRTELLFIHRA 592
            D +RE  R    Q A T+DG  IE+AANIA   +A+ A  NGA+ VGL RTE+L++ R 
Sbjct: 358 QDALREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRT 417

Query: 593 AAPTTDEHRQSYQAIVDALSGRTAIIRTLDVGADKEVDYLTLPPEPNPALGLRGIRLAQV 652
           +AP   E    +   +++ +GR+ I+RT+D+G DK VDYL +P E NP LG R +R+ + 
Sbjct: 418 SAPGESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEE 477

Query: 653 RPDLLDDQLRGLLAVQPLGAVRILLPMVTDVGELIRIRKRIDEFARELGR-----TEPIE 707
              L   QLR +L     G+++I++PM++ + E++ +++++ E  ++L        E I+
Sbjct: 478 YASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQ 537

Query: 708 VGVMIEVPSAALLADQLAQHADFLSIGTNDLTQYTLAMDRCQADLAAQADGLHPAVLRLI 767
           +G+M+EVPS   + DQ  +  DF SIG+NDLTQY LA+DR  A +    + L+PA LR +
Sbjct: 538 LGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRAL 597

Query: 768 AATVQGADKHGKWVGVCGALAGDPLAMPLLVGLGVTELSVDPVSVPGIKARVRNLDYQLC 827
              VQ   + GKW+G+CG L      +PLLVGLG+ ELS+   S+P  KAR+  LD + C
Sbjct: 598 DYAVQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSREC 657

Query: 828 RQRAQDALALESAQAV 843
           RQ    A+A  ++  V
Sbjct: 658 RQLLNQAMACRTSLEV 673