Pairwise Alignments

Query, 545 a.a., chromosomal replication initiator protein DnaA from Burkholderia phytofirmans PsJN

Subject, 507 a.a., Chromosomal replication initiator protein DnaA from Pseudomonas sp. DMC3

 Score =  469 bits (1207), Expect = e-136
 Identities = 261/541 (48%), Positives = 351/541 (64%), Gaps = 39/541 (7%)

Query: 3   DFWQHCSALLERELTPQQYVTWIKPLAPVAFDAAANTLSIAAPNRFKLDWVKSQFSGRIA 62
           + WQ C  LL  EL  QQ+ TWI+PL     +A  + L + APNRF LDWV  ++ GR+ 
Sbjct: 4   ELWQQCVELLREELPAQQFNTWIRPLQ---VEAEGDELRVYAPNRFVLDWVNEKYLGRVL 60

Query: 63  DMARDFWQAPVDVQFVLDPKAGMRAPAAAAPAPASARPASAPGSMGGSAGNGAAVDAAVG 122
           ++              LD       PA +      ++ +SAP          AA +A + 
Sbjct: 61  EL--------------LDEHGNGSTPALSLLI--GSKRSSAPR---------AAPNAPLA 95

Query: 123 AVQAAQAARAAGTNGANNAMANLNANARAAAEQNANARAAAADDSADLDLPSLDANEAAA 182
           A Q AQA +A     +N A     A A+ + ++ A      + DS D    +  A++ A 
Sbjct: 96  AAQVAQA-QANNVPASNPAPTPAPAPAKRSTQKTAEVSEEPSRDSFDPMAGA--ASQQAP 152

Query: 183 ARRTWRPGQSASSNGNGETDSMYERSKLNPVLTFDNFVTGKANQLARAAAIQVADNPGIS 242
            R   R  Q   +        +   S LN   TF+NFV GK+NQLARAAA QVADNP   
Sbjct: 153 VRAEQRTVQVEGA--------LKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHG 204

Query: 243 YNPLFLYGGVGLGKTHLIHAIGNQLLMDKAGARIRYIHAEQYVSDVVKAYQRKAFDDFKR 302
           YNPLFLYGGVGLGKTHL+HA+GN LL     A++ Y+H+E++V+D+VKA Q  A ++FKR
Sbjct: 205 YNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKR 264

Query: 303 YYHSLDLLLIDDIQFFSGKSRTQEEFFYAFEALVANKAQVIITSDTYPKEISGIDDRLIS 362
           +Y S+D LLIDDIQFF+ K R+QEEFF+ F AL+    QVI+TSD YPKEI G+++RL S
Sbjct: 265 FYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKS 324

Query: 363 RFDSGLTVAIEPPELEMRVAILMRKAQSEFVSLNEDVAFFVAKHLRSNVRELEGALRKIL 422
           RF  GLTVA+EPPELE RVAILM+KA    V L  D AFF+A+ +RSNVRELEGAL++++
Sbjct: 325 RFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVI 384

Query: 423 AYSKFHGREITIEVTKEALKDLLTVQNRQISVENIQKTTADFYSIKVADMYSKKRPANIA 482
           A+S F GR+ITIE+ +E+LKDLL +Q++ +SV+NIQ+T A++Y IK++D+ SK+R  ++A
Sbjct: 385 AHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVA 444

Query: 483 RPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIADERSKDAQLNHELHVLEQT 542
           RPRQ+AM L+KELT  SLPEIG++FGGRDHTTVLHA RKI + +  DA +  +   L +T
Sbjct: 445 RPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLLRT 504

Query: 543 L 543
           L
Sbjct: 505 L 505