Pairwise Alignments

Query, 409 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 401 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  421 bits (1083), Expect = e-122
 Identities = 208/399 (52%), Positives = 279/399 (69%), Gaps = 3/399 (0%)

Query: 8   AAVAACLFAHSLSQPALAQSAAYSDGKIKIGILTDLSGQLSDSTGQGSIAAAQMAVEDFG 67
           +A+AA     +++ PA   SA  SDGK+KIGIL D SG  +D  G+ S  AA+MA EDFG
Sbjct: 4   SAIAAATLTAAVALPA---SAEISDGKVKIGILNDQSGVYADFGGKWSFEAAKMAAEDFG 60

Query: 68  GAVNGTPVELIFADHQNKADVGASTARRWYDVDQVDAIMDVPNSAVALAVQQITKEKNRV 127
           G V   P+E++ ADHQNK D+ ++ +R+WYD +QVD+IM++  S+VALAVQ I+K K ++
Sbjct: 61  GKVLDAPIEIVTADHQNKPDIASNISRQWYDREQVDSIMELTTSSVALAVQGISKSKKKI 120

Query: 128 AIFSSPASSDLTGKACTPNGIHWTYDTYALAHVTGEAVVASGFDSWYFLTSDYAFGHALE 187
            + +  A+++LTGK C+P G HW YDT+ALA  TG A+V+ G DSWYFLT+DYAFG++LE
Sbjct: 121 NLVTGAATTELTGKQCSPYGFHWAYDTHALAVGTGGALVSQGGDSWYFLTADYAFGYSLE 180

Query: 188 RDTGAVVESQKGKVVGSVRMPANNADFSSFLLQAQASPAKVVALATAGADTQNAIKQAAE 247
             TG  V+S+ G++ G+VR P  + D+SSFLLQAQ+S AKV+ LA AG DT N+IKQAAE
Sbjct: 181 EQTGKFVKSKGGEIKGAVRHPLASTDYSSFLLQAQSSGAKVIGLANAGLDTANSIKQAAE 240

Query: 248 FGLGQSGKNIVALLLAISEVHALGLPATQGIMLTTPFYWDMDDETRAFAKRFFEKRKAMP 307
           FG+   G+ + ALL  ++EVH LGL A QG+ LT  FYWD DD++R F +RFF++   MP
Sbjct: 241 FGIVAGGQRLAALLFTLAEVHGLGLDAAQGLTLTESFYWDRDDKSREFGERFFKRTGRMP 300

Query: 308 TFYQAGVYGAVSHYLKAIKAAGTDAAPTVMKTMKETPVNDFMTKNGTVREDGRVLRDMYL 367
               AG Y  V  YLKAI+ AGTDA   V K M E PV+D   +N  V  +GR++ D+YL
Sbjct: 301 NMVHAGTYSGVMQYLKAIEKAGTDATEPVAKAMHEMPVDDVFARNAKVGANGRLISDVYL 360

Query: 368 FQVKTPAESKSPWDYYKLVRSVPADRAYRPLSESDCPLV 406
            +VK P ESK  WDYYK++ +VP D AY   ++S C LV
Sbjct: 361 MEVKKPEESKRAWDYYKVLATVPGDEAYIKPADSGCELV 399