Pairwise Alignments

Query, 310 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 298 a.a., LysR substrate-binding domain-containing protein from Pseudomonas sp. BP01

 Score =  187 bits (476), Expect = 2e-52
 Identities = 110/296 (37%), Positives = 164/296 (55%), Gaps = 8/296 (2%)

Query: 6   GFVVFVQVAETRSFVAAGRLLGVSASAIGKSVARLEEKLGVRLFHRSTRSVTLTAEGTLF 65
           G   FV VAE+  F AA   LGVS+S I + +ARLEE+L  RL +RSTR VTL+  G  F
Sbjct: 7   GIDEFVAVAESGQFTAAAERLGVSSSHISRQIARLEERLQTRLLYRSTRRVTLSEAGQTF 66

Query: 66  LERSRRILAEIEAAELELSQATAAPRGRLRVSLPLV--SSLVLPVLGEFMREYPEIELDL 123
           L+  +R+    E A   +    + P+G LR++  +      ++P++  FM  YP++ +D+
Sbjct: 67  LQHCQRLQDGREEALRAMGDLASEPKGLLRMTCAVAYGERFIVPLVTRFMALYPQLRVDV 126

Query: 124 DFTDRLVDVIEDGFDAVVRTGEPADSRLSARRLGRFHMRLVASPDYLARRGIPRTPTDLL 183
           + ++  +D++ +G D  +R G  ADSRL A RL    M L ASP YL R G P + ++L 
Sbjct: 127 ELSNHTLDLLHEGMDLAIRLGRLADSRLVATRLAPRRMYLCASPAYLERYGRPHSLSELA 186

Query: 184 QHSCLHYRFPNSGKLETWALRQTPGEPELRLPTSMICNNIETRVCFALQGLGIAYLPDFS 243
           +H+CL       G  + WAL+Q   E   R+  +  CN+ +  +  ALQG+G+  LPD+ 
Sbjct: 187 RHNCL------VGSSDLWALQQDGREISQRIQGNWRCNSGQAVLDAALQGIGLCQLPDYY 240

Query: 244 IREPLADGRLQPILADHVERTGVFHVLWPASKHPSPKVRALVDFLHARVFPAPQSR 299
           + E L  G L  +L  H         L+P  +H SPKVR LVD+L   +   P+ R
Sbjct: 241 VLEHLNSGALVSLLEAHQPPNTAVWALYPQQRHLSPKVRRLVDYLKEGLAGLPEYR 296