Pairwise Alignments

Query, 358 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Azospirillum sp. SherDot2

Subject, 221 a.a., L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (323), Expect = 9e-35
 Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 144 PAVPTERWSGLPVSLLLAVVGLAGAFPLAVLLALARRSSMGGVRTLAVLFIEVTRGVPLI 203
           PA+P   W+G+ ++L L  +G+ G   L  LLAL R SS   +  +A  ++   R +PL+
Sbjct: 8   PAIPG-LWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLL 66

Query: 204 AVLYVATLLLPLMLP----AGAAIDKLLRAQIAIILFVSAYLAEIVRAGLQSIPAGQYEA 259
            V+    L +P +L         I       +A ++F +AY  EIVRAG+QSI  GQ  A
Sbjct: 67  LVITWFYLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGA 126

Query: 260 AQALGLGYWQSTRLVILPQALRTVIPSIVTLAIGLFQDTTLIIVIGLFDLLNTARTAAKD 319
           AQALG+ Y Q  RL+ILPQA R + P ++  +I LFQDT+L+  +GL D LN +R++   
Sbjct: 127 AQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGD- 185

Query: 320 PAWLGFYDEAFGFAALIYLTVCVIASRYSLWLERR 354
              +G  +E    A L+Y T+   AS     L++R
Sbjct: 186 --IIGRANEFLIIAGLVYFTISFAASLLVKRLQKR 218