Pairwise Alignments

Query, 461 a.a., Vitamin B6 salvage pathway transcriptional repressor PtsJ from Azospirillum sp. SherDot2

Subject, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (367), Expect = 2e-39
 Identities = 122/462 (26%), Positives = 211/462 (45%), Gaps = 36/462 (7%)

Query: 2   TKWHPDASALSRPVYLSLADQVQRAITQGQLAVGDQLPTHRQLADELGISVQTVSRAYEE 61
           T W PD      P Y  L   +++ I Q +L  G +LP  R+LAD LG+++ TV+RAY  
Sbjct: 3   TIWIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYAL 62

Query: 62  LIRRGLISGETGRGTFIRAAQTEVDPPYIPQRTDEVIDLSILKPVC-EPL--HVEAMRGA 118
             +RG +    G GT++ A+              E+ +L +    C +PL   +  +   
Sbjct: 63  AEQRGYVEARIGDGTYVNASP-----------VPEMANLQLNMATCQQPLTDQISTLSDC 111

Query: 119 LVELAAS-LPPAVVLSFRPNTLFARHRATAVSWLRHCGVETTAANVTLTNGATAGMTIAL 177
           L  LA      + +L +R N L  +H+ T   WL+  G+E  +  +  T+G    +   L
Sbjct: 112 LSLLAKDPTKLSQLLGYRANPL-DQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFACL 170

Query: 178 MAAAPPGSTVVTEEVGHHTLLPLASYLGIKLRGVAIDEDGIRPDALDAACRDGTAKALFV 237
            A    G  ++ E+  +  +   A  LGI   GV +  +G+     +A  +    K +++
Sbjct: 171 NAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIYL 230

Query: 238 MPNPINATATHMGEERRREIARLAQRHNLSIVENDPLGPLLSERRPPLAALAP----ERT 293
             N  N T     E++R+++  LAQ++   I+E+D    L  E   PL  LA     +R 
Sbjct: 231 TLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDVNYCLPEEWHSPLWQLAQVLNIQRV 290

Query: 294 LYVTSFTKTVMPGLRTGYLVVPDRLLAAVTNRHLVTNWIATPIVAEIATRWVESGFAMEM 353
           +Y++S +K    GLR G+++VP+ L+AA+        W+ +P+  E+A + ++ G     
Sbjct: 291 IYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRGH---- 346

Query: 354 VEWQRKALHR---RHALAAELLKGIPHRSHPEGLHLWLPLGEGRPEATFVSHARHQGVAL 410
           +   R A+ R   +  +A     G+  R    GL+ W+ L E       V+    +GV +
Sbjct: 347 ITANRDAIIRERQQQCIALGQRLGLTQRW--RGLNGWIQLPEDIKAHHLVTALAAKGVLI 404

Query: 411 APGSAFAIGPGTRPDALRVSIGSTTEAELHTGLRVIVNLLNS 452
             G  F        + +R+S+G    AE  T  R+ +  + S
Sbjct: 405 RHGDDF----NCHDNFIRLSLGG---AENDTQFRLAIECIES 439