Pairwise Alignments

Query, 335 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 316 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 2e-27
 Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 5/231 (2%)

Query: 39  ELTVAHSTWVGYGPLYIAKEKGFFKDEGLDVRLVLMEDVKTRMPALTAGRI-DVAVTTVD 97
           ++ +A + W GY  LY+A+++GF++  GL+V  V +  +     A  +GR+     T ++
Sbjct: 23  KIIIAINPWPGYEVLYLAQQQGFYEAAGLNVGFVQVATLSDAQRAYLSGRVAGFTSTMIE 82

Query: 98  AVLGFTSADRPLTYLFAVDDSRGGDGIVANKAIKDIAGLKGRKVAFTEGSVSQFFLSVLL 157
           AV       + +  + A D S GGD I+A     DI  LKG+ +     S+  F L+  L
Sbjct: 83  AVQVEAFGGKRVKVVLAADYSDGGDVILAKTEYGDIPSLKGKTIGCEVSSLGIFILARAL 142

Query: 158 KDAGLSVKDVEALNMTAGDAGAAFVAGKVDAAVTWEPWLSRGKATSHGALLVDSSAK-PG 216
              GL++ DV  +N+  GD       G +DA VT+ P+ S       G   V S+ + PG
Sbjct: 143 AANGLTLDDVTVMNVEQGDGPRHLQLGLIDAMVTYPPY-SLAAMKQEGVHQVFSTKEIPG 201

Query: 217 LITDVMVTTKAKLEARRPEMVALYR-AWSKAVDWQKAHAAEADAIMAKGVG 266
            I D + +  A+  AR P+ V   R  W +A+D+ + H  EA AIMA+  G
Sbjct: 202 EILDTL-SISAETLARHPDFVPKLRVVWQQALDYVQEHPTEAIAIMARREG 251